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  5. LOC_Os12g05550.1

LOC_Os12g05550.1 (LOC_Os12g05550)


Aliases : LOC_Os12g05550

Description : AGP beta-1,6-galactosyltransferase


Gene families : OG0002166 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002166_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os12g05550.1

Target Alias Description ECC score Gene Family Method Actions
Ala_g02264 No alias beta-1,6-galactosyltransferase *(GALT29) & original... 0.02 OrthoFinder output from all 47 species
Als_g01832 No alias beta-1,6-galactosyltransferase *(GALT29) & original... 0.04 OrthoFinder output from all 47 species
Als_g13677 No alias beta-1,6-galactosyltransferase *(GALT29) & original... 0.03 OrthoFinder output from all 47 species
Aop_g07751 No alias beta-1,6-galactosyltransferase *(GALT29) & original... 0.03 OrthoFinder output from all 47 species
Aspi01Gene41502.t1 Aspi01Gene41502 beta-1,6-galactosyltransferase *(GALT29) & original... 0.03 OrthoFinder output from all 47 species
Aspi01Gene45996.t1 Aspi01Gene45996 beta-1,6-galactosyltransferase *(GALT29) & original... 0.02 OrthoFinder output from all 47 species
Aspi01Gene54870.t1 Aspi01Gene54870 beta-1,6-galactosyltransferase *(GALT29) & original... 0.02 OrthoFinder output from all 47 species
Dcu_g06151 No alias beta-1,6-galactosyltransferase *(GALT29) & original... 0.04 OrthoFinder output from all 47 species
LOC_Os04g42760.1 LOC_Os04g42760 AGP beta-1,6-galactosyltransferase 0.04 OrthoFinder output from all 47 species
Len_g12350 No alias beta-1,6-galactosyltransferase *(GALT29) & original... 0.02 OrthoFinder output from all 47 species
Mp1g19260.1 No alias AGP beta-1,6-galactosyltransferase 0.03 OrthoFinder output from all 47 species
Nbi_g22203 No alias beta-1,6-galactosyltransferase *(GALT29) & original... 0.03 OrthoFinder output from all 47 species
Spa_g28132 No alias beta-1,6-galactosyltransferase *(GALT29) & original... 0.03 OrthoFinder output from all 47 species
Zm00001e007633_P001 Zm00001e007633 AGP beta-1,6-galactosyltransferase 0.04 OrthoFinder output from all 47 species
Zm00001e019212_P001 Zm00001e019212 AGP beta-1,6-galactosyltransferase 0.02 OrthoFinder output from all 47 species
Zm00001e024135_P001 Zm00001e024135 AGP beta-1,6-galactosyltransferase 0.08 OrthoFinder output from all 47 species
Zm00001e041193_P001 Zm00001e041193 Sialyltransferase-like protein 3 OS=Oryza sativa subsp.... 0.05 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
BP GO:0006486 protein glycosylation IEA Interproscan
MF GO:0008373 sialyltransferase activity IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0015267 channel activity IEP HCCA
CC GO:0016020 membrane IEP HCCA
MF GO:0022803 passive transmembrane transporter activity IEP HCCA
InterPro domains Description Start Stop
IPR001675 Glyco_trans_29 303 373
IPR001675 Glyco_trans_29 160 217
No external refs found!