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  5. LOC_Os12g05200.1

LOC_Os12g05200.1 (ATAHL1, AHL1, LOC_Os12g05200)


Aliases : ATAHL1, AHL1, LOC_Os12g05200

Description : AT-hook motif nuclear-localized protein 1 OS=Arabidopsis thaliana (sp|q8vyj2|ahl1_arath : 160.0)


Gene families : OG0000263 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000263_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os12g05200.1

Target Alias Description ECC score Gene Family Method Actions
AT2G45850 No alias AT hook motif DNA-binding family protein 0.04 OrthoFinder output from all 47 species
AT5G62260 No alias AT hook motif DNA-binding family protein 0.04 OrthoFinder output from all 47 species
Adi_g021113 No alias AHL clade-B transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Dde_g48621 No alias AHL clade-B transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g09055 ATAHL1, AHL1 AHL clade-B transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01013426001 No alias AT-hook motif nuclear-localized protein 10... 0.04 OrthoFinder output from all 47 species
Len_g18915 No alias AHL clade-B transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
MA_10434727g0010 No alias AT-hook motif nuclear-localized protein 1 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
MA_140299g0010 No alias no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Sam_g49715 No alias AHL clade-B transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g52522 No alias AHL clade-B transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Solyc01g091370.4.1 ATAHL1, AHL1,... AT-hook motif nuclear-localized protein 1 OS=Arabidopsis... 0.04 OrthoFinder output from all 47 species
Solyc01g094460.3.1 Solyc01g094460 AT-hook motif nuclear-localized protein 9 OS=Arabidopsis... 0.05 OrthoFinder output from all 47 species
Solyc08g006950.4.1 Solyc08g006950 AT-hook motif nuclear-localized protein 10... 0.05 OrthoFinder output from all 47 species
Spa_g41096 No alias AHL clade-B transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g51610 No alias AHL clade-B transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e002444_P001 Zm00001e002444 AT-hook motif nuclear-localized protein 10... 0.05 OrthoFinder output from all 47 species
Zm00001e003567_P004 Zm00001e003567 AT-hook motif nuclear-localized protein 10... 0.03 OrthoFinder output from all 47 species
Zm00001e016260_P002 Zm00001e016260 AT-hook motif nuclear-localized protein 9 OS=Arabidopsis... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0006508 proteolysis IEP HCCA
BP GO:0006511 ubiquitin-dependent protein catabolic process IEP HCCA
BP GO:0007275 multicellular organism development IEP HCCA
BP GO:0009056 catabolic process IEP HCCA
BP GO:0009057 macromolecule catabolic process IEP HCCA
CC GO:0018995 host cellular component IEP HCCA
BP GO:0019941 modification-dependent protein catabolic process IEP HCCA
BP GO:0032501 multicellular organismal process IEP HCCA
BP GO:0032502 developmental process IEP HCCA
CC GO:0033643 host cell part IEP HCCA
CC GO:0033646 host intracellular part IEP HCCA
CC GO:0033647 host intracellular organelle IEP HCCA
CC GO:0033648 host intracellular membrane-bounded organelle IEP HCCA
CC GO:0042025 host cell nucleus IEP HCCA
BP GO:0043632 modification-dependent macromolecule catabolic process IEP HCCA
BP GO:0044248 cellular catabolic process IEP HCCA
BP GO:0044260 cellular macromolecule metabolic process IEP HCCA
BP GO:0044265 cellular macromolecule catabolic process IEP HCCA
BP GO:0048856 anatomical structure development IEP HCCA
BP GO:0051603 proteolysis involved in protein catabolic process IEP HCCA
BP GO:1901575 organic substance catabolic process IEP HCCA
InterPro domains Description Start Stop
IPR005175 PPC_dom 48 161
No external refs found!