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LOC_Os12g03822.1 (LOC_Os12g03822)


Aliases : LOC_Os12g03822

Description : Histone-binding protein MSI1 homolog OS=Oryza sativa subsp. japonica (sp|q10g81|msi1_orysj : 130.0)


Gene families : OG0004386 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0004386_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os12g03822.1

Target Alias Description ECC score Gene Family Method Actions
Azfi_s0043.g026948 No alias substrate adaptor *(HTD1/DWD1) of CUL4-based E3... 0.03 OrthoFinder output from all 47 species
Cpa|evm.model.tig00001493.9 No alias No description available 0.05 OrthoFinder output from all 47 species
GSVIVT01015210001 No alias WD-40 repeat-containing protein MSI2 OS=Arabidopsis thaliana 0.04 OrthoFinder output from all 47 species
Lfl_g03164 No alias substrate adaptor *(HTD1/DWD1) of CUL4-based E3... 0.05 OrthoFinder output from all 47 species
Mp4g21540.1 No alias Histone-binding protein MSI1 homolog OS=Oryza sativa... 0.03 OrthoFinder output from all 47 species
Sam_g10251 No alias substrate adaptor *(HTD1/DWD1) of CUL4-based E3... 0.03 OrthoFinder output from all 47 species
Solyc07g039200.4.1 Solyc07g039200 WD-40 repeat-containing protein MSI2 OS=Arabidopsis... 0.06 OrthoFinder output from all 47 species
Zm00001e027495_P001 Zm00001e027495 WD-40 repeat-containing protein MSI4 OS=Arabidopsis... 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0000774 adenyl-nucleotide exchange factor activity IEP HCCA
BP GO:0006457 protein folding IEP HCCA
MF GO:0042802 identical protein binding IEP HCCA
MF GO:0042803 protein homodimerization activity IEP HCCA
MF GO:0046983 protein dimerization activity IEP HCCA
MF GO:0051087 chaperone binding IEP HCCA
MF GO:0060590 ATPase regulator activity IEP HCCA
MF GO:0098772 molecular function regulator activity IEP HCCA
InterPro domains Description Start Stop
IPR001680 WD40_repeat 350 386
IPR001680 WD40_repeat 263 296
IPR022052 Histone-bd_RBBP4_N 43 109
No external refs found!