1. Home
  2. Species
  3. Oryza sativa
  4. Sequence
  5. LOC_Os12g03180.1

LOC_Os12g03180.1 (LOC_Os12g03180)


Aliases : LOC_Os12g03180

Description : MAD3/BUBR1 spindle assembly checkpoint protein


Gene families : OG0003147 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0003147_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os12g03180.1
Cluster HCCA: Cluster_27

Target Alias Description ECC score Gene Family Method Actions
AT2G33560 BUBR1 BUB1-related (BUB1: budding uninhibited by benzymidazol 1) 0.07 OrthoFinder output from all 47 species
Als_g05447 BUBR1 spindle assembly checkpoint protein *(MAD3) & original... 0.03 OrthoFinder output from all 47 species
Aop_g01182 BUBR1 spindle assembly checkpoint protein *(MAD3) & original... 0.03 OrthoFinder output from all 47 species
Azfi_s0544.g076394 No alias not classified & original description: CDS=112-1563 0.03 OrthoFinder output from all 47 species
Cpa|evm.model.tig00000037.22 BUBR1 Cell cycle.mitosis and meiosis.sister chromatid... 0.02 OrthoFinder output from all 47 species
Cre07.g351450 BUBR1 Mitotic spindle checkpoint protein BUBR1 OS=Arabidopsis thaliana 0.01 OrthoFinder output from all 47 species
GSVIVT01013446001 BUBR1 Cell cycle.mitosis and meiosis.sister chromatid... 0.06 OrthoFinder output from all 47 species
GSVIVT01032774001 No alias Cell cycle.mitosis and meiosis.sister chromatid... 0.04 OrthoFinder output from all 47 species
Gb_15966 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Gb_18619 BUBR1 MAD3/BUBR1 spindle assembly checkpoint protein 0.03 OrthoFinder output from all 47 species
Len_g20532 BUBR1 spindle assembly checkpoint protein *(MAD3) & original... 0.03 OrthoFinder output from all 47 species
Lfl_g14545 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
MA_213025g0010 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Nbi_g04683 BUBR1 spindle assembly checkpoint protein *(MAD3) & original... 0.05 OrthoFinder output from all 47 species
Ppi_g10004 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g16993 BUBR1 spindle assembly checkpoint protein *(MAD3) & original... 0.02 OrthoFinder output from all 47 species
Sam_g03692 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g06869 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g24970 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Smo404118 BUBR1 Cell cycle.mitosis and meiosis.sister chromatid... 0.03 OrthoFinder output from all 47 species
Smo404289 BUBR1 Cell cycle.mitosis and meiosis.sister chromatid... 0.03 OrthoFinder output from all 47 species
Solyc06g051040.4.1 Solyc06g051040 MAD3/BUBR1 spindle assembly checkpoint protein 0.04 OrthoFinder output from all 47 species
Spa_g20707 BUBR1 spindle assembly checkpoint protein *(MAD3) & original... 0.02 OrthoFinder output from all 47 species
Zm00001e014092_P001 BUBR1, Zm00001e014092 MAD3/BUBR1 spindle assembly checkpoint protein 0.08 OrthoFinder output from all 47 species
Zm00001e025052_P001 BUBR1, Zm00001e025052 Mitotic spindle checkpoint protein BUBR1 OS=Arabidopsis... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003774 cytoskeletal motor activity IEP HCCA
MF GO:0003777 microtubule motor activity IEP HCCA
MF GO:0005524 ATP binding IEP HCCA
CC GO:0005694 chromosome IEP HCCA
BP GO:0006996 organelle organization IEP HCCA
BP GO:0007017 microtubule-based process IEP HCCA
BP GO:0007018 microtubule-based movement IEP HCCA
MF GO:0008017 microtubule binding IEP HCCA
MF GO:0008092 cytoskeletal protein binding IEP HCCA
BP GO:0008608 attachment of spindle microtubules to kinetochore IEP HCCA
MF GO:0015631 tubulin binding IEP HCCA
BP GO:0022402 cell cycle process IEP HCCA
MF GO:0030554 adenyl nucleotide binding IEP HCCA
CC GO:0031262 Ndc80 complex IEP HCCA
MF GO:0032559 adenyl ribonucleotide binding IEP HCCA
MF GO:0035639 purine ribonucleoside triphosphate binding IEP HCCA
MF GO:0043167 ion binding IEP HCCA
BP GO:0051276 chromosome organization IEP HCCA
BP GO:0051315 attachment of mitotic spindle microtubules to kinetochore IEP HCCA
BP GO:1903047 mitotic cell cycle process IEP HCCA
InterPro domains Description Start Stop
IPR013212 Mad3/Bub1_I 27 140
No external refs found!