LOC_Os12g02540.1 (LOC_Os12g02540)


Aliases : LOC_Os12g02540

Description : BTB/POZ domain-containing protein At3g08570 OS=Arabidopsis thaliana (sp|q9c9z7|y3857_arath : 555.0)


Gene families : OG0000584 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000584_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os12g02540.1

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00057p00189750 evm_27.TU.AmTr_v1... BTB/POZ domain-containing protein At1g03010... 0.03 OrthoFinder output from all 47 species
AT3G49970 No alias Phototropic-responsive NPH3 family protein 0.03 OrthoFinder output from all 47 species
Ala_g13238 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g11100 No alias substrate adaptor *(NRL) of CUL3-based E3 ubiquitin... 0.02 OrthoFinder output from all 47 species
Aob_g14246 No alias substrate adaptor *(NRL) of CUL3-based E3 ubiquitin... 0.03 OrthoFinder output from all 47 species
Aop_g12703 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene28639.t1 Aspi01Gene28639 substrate adaptor *(NCL/NCH) of CUL3-BTB E3 ubiquitin... 0.02 OrthoFinder output from all 47 species
Cba_g05247 No alias substrate adaptor *(NRL) of CUL3-based E3 ubiquitin... 0.02 OrthoFinder output from all 47 species
Cba_g30178 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Cba_g65093 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ceric.25G051000.1 Ceric.25G051000 not classified & original description: pacid=50594195... 0.06 OrthoFinder output from all 47 species
Dac_g08261 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g05719 No alias substrate adaptor *(NCL/NCH) of CUL3-BTB E3 ubiquitin... 0.03 OrthoFinder output from all 47 species
GSVIVT01024541001 RPT2 Root phototropism protein 2 OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
Gb_00052 RPT2 Root phototropism protein 2 OS=Arabidopsis thaliana... 0.05 OrthoFinder output from all 47 species
Gb_15614 No alias BTB/POZ domain-containing protein At1g03010... 0.02 OrthoFinder output from all 47 species
MA_7675g0010 No alias BTB/POZ domain-containing protein At5g48800... 0.03 OrthoFinder output from all 47 species
Ppi_g01259 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Smo231529 No alias BTB/POZ domain-containing protein At5g48800... 0.06 OrthoFinder output from all 47 species
Solyc09g061250.4.1 Solyc09g061250 BTB/POZ domain-containing protein At5g48800... 0.04 OrthoFinder output from all 47 species
Spa_g46290 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Zm00001e039269_P001 Zm00001e039269 BTB/POZ domain-containing protein At3g08570... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003677 DNA binding IEP HCCA
MF GO:0008289 lipid binding IEP HCCA
InterPro domains Description Start Stop
IPR027356 NPH3_dom 207 463
No external refs found!