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  5. LOC_Os02g43690.3

LOC_Os02g43690.3


Description : GTP-binding protein YPTM2 OS=Zea mays (sp|q05737|yptm2_maize : 228.0)


Gene families : OG_01_0001076 (Archaeplastida) Phylogenetic Tree(s): OG_01_0001076_tree ,
OG_02_0001162 (LandPlants) Phylogenetic Tree(s): OG_02_0001162_tree ,
OG_03_0001063 (SeedPlants) Phylogenetic Tree(s): OG_03_0001063_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os02g43690.3
Cluster HCCA: Cluster_342

Target Alias Description ECC score Gene Family Method Actions
AT3G11730 ATFP8, RABD1, ATRABD1 Ras-related small GTP-binding family protein 0.03 Archaeplastida
Cpa|evm.model.tig00000455.18 No alias Ras-related protein RABD2c OS=Arabidopsis thaliana 0.01 Archaeplastida
Cpa|evm.model.tig00000455.19 No alias Ras-related protein RABD2c OS=Arabidopsis thaliana 0.01 Archaeplastida
Cpa|evm.model.tig00001408.10 No alias Vesicle trafficking.regulation of membrane tethering and... 0.03 Archaeplastida
Gb_01493 No alias D-class RAB GTPase 0.02 Archaeplastida
Gb_37705 No alias D-class RAB GTPase 0.02 Archaeplastida
MA_101924g0020 No alias D-class RAB GTPase 0.03 Archaeplastida
Mp3g00710.1 No alias D-class RAB GTPase 0.03 Archaeplastida
Pp3c4_21000V3.1 No alias RAS 5 0.02 Archaeplastida
Solyc05g053940.3.1 No alias D-class RAB GTPase 0.06 Archaeplastida
Zm00001e015303_P001 No alias D-class RAB GTPase 0.04 Archaeplastida
AT3G11730 ATFP8, RABD1, ATRABD1 Ras-related small GTP-binding family protein 0.03 LandPlants
Gb_37705 No alias D-class RAB GTPase 0.02 LandPlants
MA_101924g0020 No alias D-class RAB GTPase 0.03 LandPlants
Mp2g23010.1 No alias D-class RAB GTPase 0.02 LandPlants
Mp3g00710.1 No alias D-class RAB GTPase 0.03 LandPlants
Solyc05g053940.3.1 No alias D-class RAB GTPase 0.04 LandPlants
Zm00001e015303_P001 No alias D-class RAB GTPase 0.03 LandPlants
AT1G02130 ATRAB1B, RABD2A,... RAS 5 0.02 SeedPlants
AT3G11730 ATFP8, RABD1, ATRABD1 Ras-related small GTP-binding family protein 0.03 SeedPlants
Gb_01493 No alias D-class RAB GTPase 0.01 SeedPlants
Gb_37705 No alias D-class RAB GTPase 0.02 SeedPlants
MA_101924g0020 No alias D-class RAB GTPase 0.03 SeedPlants
Solyc05g053940.3.1 No alias D-class RAB GTPase 0.04 SeedPlants
Zm00001e015303_P001 No alias D-class RAB GTPase 0.03 SeedPlants

Type GO Term Name Evidence Source
MF GO:0003924 GTPase activity IEA Interproscan
MF GO:0005525 GTP binding IEA Interproscan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR001806 Small_GTPase 25 112
No external refs found!