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  5. LOC_Os12g01640.1

LOC_Os12g01640.1 (LOC_Os12g01640)


Aliases : LOC_Os12g01640

Description : no hits & (original description: none)


Gene families : OG0000166 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000166_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os12g01640.1
Cluster HCCA: Cluster_5

Target Alias Description ECC score Gene Family Method Actions
ChrUn.fgenesh.mRNA.16 No alias no hits & (original description: none) 0.08 OrthoFinder output from all 47 species
LOC_Os01g07820.1 LOC_Os01g07820 no hits & (original description: none) 0.08 OrthoFinder output from all 47 species
LOC_Os01g19590.1 LOC_Os01g19590 no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
LOC_Os01g19960.1 LOC_Os01g19960 no hits & (original description: none) 0.11 OrthoFinder output from all 47 species
LOC_Os01g20190.1 LOC_Os01g20190 no hits & (original description: none) 0.06 OrthoFinder output from all 47 species
LOC_Os01g28420.1 LOC_Os01g28420 no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
LOC_Os01g29710.1 LOC_Os01g29710 no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
LOC_Os01g33630.1 LOC_Os01g33630 no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
LOC_Os01g34360.1 LOC_Os01g34360 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
LOC_Os01g38810.1 LOC_Os01g38810 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
LOC_Os01g46330.1 LOC_Os01g46330 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
LOC_Os01g71910.1 LOC_Os01g71910 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
LOC_Os02g08280.1 LOC_Os02g08280 no hits & (original description: none) 0.06 OrthoFinder output from all 47 species
LOC_Os02g16590.1 LOC_Os02g16590 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
LOC_Os02g24300.1 LOC_Os02g24300 no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
LOC_Os02g25560.1 LOC_Os02g25560 no hits & (original description: none) 0.08 OrthoFinder output from all 47 species
LOC_Os02g37730.1 LOC_Os02g37730 no hits & (original description: none) 0.06 OrthoFinder output from all 47 species
LOC_Os02g51230.1 LOC_Os02g51230 no hits & (original description: none) 0.09 OrthoFinder output from all 47 species
LOC_Os03g07680.1 LOC_Os03g07680 no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
LOC_Os03g27520.1 LOC_Os03g27520 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
LOC_Os03g30080.1 LOC_Os03g30080 no hits & (original description: none) 0.08 OrthoFinder output from all 47 species
LOC_Os03g43280.1 LOC_Os03g43280 no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
LOC_Os04g03710.1 LOC_Os04g03710 Subtilisin-like protease SBT3.10 OS=Arabidopsis thaliana... 0.06 OrthoFinder output from all 47 species
LOC_Os04g06100.1 LOC_Os04g06100 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
LOC_Os04g07930.1 LOC_Os04g07930 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
LOC_Os04g19000.1 LOC_Os04g19000 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
LOC_Os04g20450.1 LOC_Os04g20450 no hits & (original description: none) 0.09 OrthoFinder output from all 47 species
LOC_Os04g23250.1 LOC_Os04g23250 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
LOC_Os04g23280.1 LOC_Os04g23280 no hits & (original description: none) 0.1 OrthoFinder output from all 47 species
LOC_Os04g25590.1 LOC_Os04g25590 no hits & (original description: none) 0.07 OrthoFinder output from all 47 species
LOC_Os04g28650.1 LOC_Os04g28650 no hits & (original description: none) 0.11 OrthoFinder output from all 47 species
LOC_Os04g29440.1 LOC_Os04g29440 no hits & (original description: none) 0.16 OrthoFinder output from all 47 species
LOC_Os04g43590.1 LOC_Os04g43590 no hits & (original description: none) 0.19 OrthoFinder output from all 47 species
LOC_Os04g44010.1 LOC_Os04g44010 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
LOC_Os05g03950.1 LOC_Os05g03950 no hits & (original description: none) 0.11 OrthoFinder output from all 47 species
LOC_Os05g10230.1 LOC_Os05g10230 no hits & (original description: none) 0.08 OrthoFinder output from all 47 species
LOC_Os05g14000.1 LOC_Os05g14000 no hits & (original description: none) 0.08 OrthoFinder output from all 47 species
LOC_Os05g14460.1 LOC_Os05g14460 no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
LOC_Os05g18570.1 LOC_Os05g18570 no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
LOC_Os05g26100.1 LOC_Os05g26100 no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
LOC_Os05g35880.1 LOC_Os05g35880 no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
LOC_Os05g39460.1 LOC_Os05g39460 no hits & (original description: none) 0.12 OrthoFinder output from all 47 species
LOC_Os05g50880.1 LOC_Os05g50880 no hits & (original description: none) 0.09 OrthoFinder output from all 47 species
LOC_Os06g10380.1 LOC_Os06g10380 no hits & (original description: none) 0.11 OrthoFinder output from all 47 species
LOC_Os06g15050.1 LOC_Os06g15050 no hits & (original description: none) 0.06 OrthoFinder output from all 47 species
LOC_Os06g15340.1 LOC_Os06g15340 no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
LOC_Os06g15850.1 EIN4, LOC_Os06g15850 Ethylene receptor 4 OS=Oryza sativa subsp. japonica... 0.07 OrthoFinder output from all 47 species
LOC_Os06g19310.1 LOC_Os06g19310 no hits & (original description: none) 0.08 OrthoFinder output from all 47 species
LOC_Os06g21150.1 LOC_Os06g21150 no hits & (original description: none) 0.1 OrthoFinder output from all 47 species
LOC_Os06g27900.1 LOC_Os06g27900 no hits & (original description: none) 0.1 OrthoFinder output from all 47 species
LOC_Os06g33030.1 LOC_Os06g33030 no hits & (original description: none) 0.07 OrthoFinder output from all 47 species
LOC_Os06g42580.1 LOC_Os06g42580 no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
LOC_Os07g03350.1 LOC_Os07g03350 no hits & (original description: none) 0.09 OrthoFinder output from all 47 species
LOC_Os07g11430.1 LOC_Os07g11430 no hits & (original description: none) 0.07 OrthoFinder output from all 47 species
LOC_Os07g11850.1 LOC_Os07g11850 no hits & (original description: none) 0.09 OrthoFinder output from all 47 species
LOC_Os07g15800.1 LOC_Os07g15800 no hits & (original description: none) 0.08 OrthoFinder output from all 47 species
LOC_Os07g32750.1 LOC_Os07g32750 no hits & (original description: none) 0.15 OrthoFinder output from all 47 species
LOC_Os07g39610.1 LOC_Os07g39610 no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
LOC_Os07g46120.1 LOC_Os07g46120 no hits & (original description: none) 0.14 OrthoFinder output from all 47 species
LOC_Os08g08670.1 LOC_Os08g08670 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
LOC_Os08g11300.1 LOC_Os08g11300 no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
LOC_Os08g12280.1 LOC_Os08g12280 no hits & (original description: none) 0.13 OrthoFinder output from all 47 species
LOC_Os08g13300.1 LOC_Os08g13300 no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
LOC_Os08g16080.1 LOC_Os08g16080 no hits & (original description: none) 0.06 OrthoFinder output from all 47 species
LOC_Os08g26280.1 LOC_Os08g26280 no hits & (original description: none) 0.09 OrthoFinder output from all 47 species
LOC_Os08g27180.1 LOC_Os08g27180 no hits & (original description: none) 0.08 OrthoFinder output from all 47 species
LOC_Os09g06700.1 LOC_Os09g06700 no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
LOC_Os09g07330.1 LOC_Os09g07330 no hits & (original description: none) 0.14 OrthoFinder output from all 47 species
LOC_Os09g09060.1 LOC_Os09g09060 no hits & (original description: none) 0.06 OrthoFinder output from all 47 species
LOC_Os09g09150.1 LOC_Os09g09150 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
LOC_Os09g11060.1 LOC_Os09g11060 no hits & (original description: none) 0.07 OrthoFinder output from all 47 species
LOC_Os09g13560.1 LOC_Os09g13560 no hits & (original description: none) 0.08 OrthoFinder output from all 47 species
LOC_Os09g14260.1 LOC_Os09g14260 Glutathione S-transferase T3 OS=Arabidopsis thaliana... 0.09 OrthoFinder output from all 47 species
LOC_Os09g15610.1 LOC_Os09g15610 no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
LOC_Os09g17290.1 LOC_Os09g17290 no hits & (original description: none) 0.07 OrthoFinder output from all 47 species
LOC_Os09g20160.1 LOC_Os09g20160 no hits & (original description: none) 0.08 OrthoFinder output from all 47 species
LOC_Os09g20450.1 LOC_Os09g20450 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
LOC_Os09g25240.1 LOC_Os09g25240 no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
LOC_Os10g06660.1 LOC_Os10g06660 no hits & (original description: none) 0.07 OrthoFinder output from all 47 species
LOC_Os10g07562.1 LOC_Os10g07562 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
LOC_Os10g08360.1 LOC_Os10g08360 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
LOC_Os10g08370.1 LOC_Os10g08370 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
LOC_Os10g08650.1 LOC_Os10g08650 no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
LOC_Os10g16800.1 LOC_Os10g16800 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
LOC_Os10g33480.1 LOC_Os10g33480 no hits & (original description: none) 0.06 OrthoFinder output from all 47 species
LOC_Os11g03950.1 LOC_Os11g03950 no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
LOC_Os11g23810.1 LOC_Os11g23810 no hits & (original description: none) 0.19 OrthoFinder output from all 47 species
LOC_Os11g24870.1 LOC_Os11g24870 no hits & (original description: none) 0.1 OrthoFinder output from all 47 species
LOC_Os11g26250.1 LOC_Os11g26250 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
LOC_Os11g31180.1 LOC_Os11g31180 no hits & (original description: none) 0.07 OrthoFinder output from all 47 species
LOC_Os11g35762.1 LOC_Os11g35762 no hits & (original description: none) 0.08 OrthoFinder output from all 47 species
LOC_Os11g40960.1 LOC_Os11g40960 no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
LOC_Os11g44100.1 LOC_Os11g44100 no hits & (original description: none) 0.1 OrthoFinder output from all 47 species
LOC_Os12g01870.1 LOC_Os12g01870 no hits & (original description: none) 0.07 OrthoFinder output from all 47 species
LOC_Os12g07630.1 LOC_Os12g07630 no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
LOC_Os12g11600.1 LOC_Os12g11600 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
LOC_Os12g14200.1 LOC_Os12g14200 no hits & (original description: none) 0.13 OrthoFinder output from all 47 species
LOC_Os12g16790.1 LOC_Os12g16790 no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
LOC_Os12g19210.1 LOC_Os12g19210 no hits & (original description: none) 0.06 OrthoFinder output from all 47 species
LOC_Os12g23240.1 LOC_Os12g23240 no hits & (original description: none) 0.17 OrthoFinder output from all 47 species
LOC_Os12g26070.1 LOC_Os12g26070 no hits & (original description: none) 0.14 OrthoFinder output from all 47 species
LOC_Os12g33060.1 PIN5, LOC_Os12g33060 auxin transporter (PIN). auxin efflux transporter (PIN) 0.07 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
BP GO:0006508 proteolysis IEA Interproscan
MF GO:0008234 cysteine-type peptidase activity IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
BP GO:0015074 DNA integration IEP HCCA
InterPro domains Description Start Stop
IPR003653 Peptidase_C48_C 919 1032
No external refs found!