1. Home
  2. Species
  3. Oryza sativa
  4. Sequence
  5. LOC_Os12g01580.1

LOC_Os12g01580.1 (LOC_Os12g01580)


Aliases : LOC_Os12g01580

Description : metal-citrate complex transporter (FRD)


Gene families : OG0000980 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000980_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os12g01580.1

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00023p00012750 evm_27.TU.AmTr_v1... Solute transport.carrier-mediated transport.MOP... 0.02 OrthoFinder output from all 47 species
AT2G38330 No alias MATE efflux family protein 0.03 OrthoFinder output from all 47 species
Aop_g11885 No alias ferric-citrate complex transporter *(FRD) & original... 0.03 OrthoFinder output from all 47 species
Ehy_g04928 No alias ferric-citrate complex transporter *(FRD) & original... 0.02 OrthoFinder output from all 47 species
Gb_00121 No alias metal-citrate complex transporter (FRD) 0.03 OrthoFinder output from all 47 species
Solyc10g085340.1.1 Solyc10g085340 metal-citrate complex transporter (FRD) 0.05 OrthoFinder output from all 47 species
Tin_g04646 No alias ferric-citrate complex transporter *(FRD) & original... 0.02 OrthoFinder output from all 47 species
Zm00001e009286_P001 Zm00001e009286 metal-citrate complex transporter (FRD) 0.05 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0015297 antiporter activity IEA Interproscan
CC GO:0016020 membrane IEA Interproscan
MF GO:0042910 xenobiotic transmembrane transporter activity IEA Interproscan
BP GO:0055085 transmembrane transport IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0004197 cysteine-type endopeptidase activity IEP HCCA
BP GO:0016485 protein processing IEP HCCA
MF GO:0051536 iron-sulfur cluster binding IEP HCCA
MF GO:0051540 metal cluster binding IEP HCCA
BP GO:0051604 protein maturation IEP HCCA
BP GO:0071586 CAAX-box protein processing IEP HCCA
InterPro domains Description Start Stop
IPR002528 MATE_fam 349 497
IPR002528 MATE_fam 190 289
No external refs found!