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  5. LOC_Os12g01550.1

LOC_Os12g01550.1 (LBD12, ASL5, PCK1,...)


Aliases : LBD12, ASL5, PCK1, LOC_Os12g01550

Description : transcription factor (AS2/LOB)


Gene families : OG0000114 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000114_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os12g01550.1
Cluster HCCA: Cluster_575

Target Alias Description ECC score Gene Family Method Actions
AT1G16530 LBD3, ASL9 ASYMMETRIC LEAVES 2-like 9 0.03 OrthoFinder output from all 47 species
Adi_g013687 LBD4 AS2/LOB-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g085261 LOB AS2/LOB-type transcription factor & original description: none 0.01 OrthoFinder output from all 47 species
Aev_g38835 LBD15, ASL11 AS2/LOB-type transcription factor & original description: none 0.01 OrthoFinder output from all 47 species
Aspi01Gene12790.t1 LBD4, Aspi01Gene12790 AS2/LOB-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Azfi_s0020.g015420 AS2 AS2/LOB-type transcription factor & original... 0.03 OrthoFinder output from all 47 species
Azfi_s0076.g037915 LBD20 AS2/LOB-type transcription factor & original... 0.05 OrthoFinder output from all 47 species
Ceric.12G063300.1 LBD15, ASL11,... AS2/LOB-type transcription factor & original... 0.02 OrthoFinder output from all 47 species
Dcu_g20332 LOB AS2/LOB-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
GSVIVT01007677001 LOB RNA biosynthesis.transcriptional activation.AS2/LOB... 0.03 OrthoFinder output from all 47 species
GSVIVT01013631001 LBD4 RNA biosynthesis.transcriptional activation.AS2/LOB... 0.03 OrthoFinder output from all 47 species
GSVIVT01027620001 LBD19 RNA biosynthesis.transcriptional activation.AS2/LOB... 0.04 OrthoFinder output from all 47 species
Gb_03653 AS2 transcription factor (AS2/LOB) 0.02 OrthoFinder output from all 47 species
Gb_20676 LBD1 transcription factor (AS2/LOB) 0.03 OrthoFinder output from all 47 species
Gb_38978 LBD15, ASL11 transcription factor (AS2/LOB) 0.04 OrthoFinder output from all 47 species
Len_g55694 LBD20 AS2/LOB-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
MA_41152g0010 LBD4 transcription factor (AS2/LOB) 0.04 OrthoFinder output from all 47 species
Ore_g42314 LBD4 AS2/LOB-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g26093 LBD25 AS2/LOB-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g31655 LBD4 AS2/LOB-type transcription factor & original description: none 0.01 OrthoFinder output from all 47 species
Sacu_v1.1_s0089.g018622 LBD15, ASL11 AS2/LOB-type transcription factor & original... 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0108.g020470 LOB AS2/LOB-type transcription factor & original... 0.02 OrthoFinder output from all 47 species
Solyc01g091400.3.1 LBD19, Solyc01g091400 transcription factor (AS2/LOB) 0.02 OrthoFinder output from all 47 species
Solyc02g086480.1.1 LOB, Solyc02g086480 transcription factor (AS2/LOB) 0.03 OrthoFinder output from all 47 species
Solyc11g045530.3.1 LBD4, Solyc11g045530 transcription factor (AS2/LOB) 0.06 OrthoFinder output from all 47 species
Spa_g29522 LBD15, ASL11 AS2/LOB-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g55835 LBD4 AS2/LOB-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g03878 LOB AS2/LOB-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g05369 LBD4 AS2/LOB-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g32137 LOB AS2/LOB-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Zm00001e019004_P002 AS2, Zm00001e019004 transcription factor (AS2/LOB) 0.02 OrthoFinder output from all 47 species
Zm00001e028582_P007 AS2, Zm00001e028582 transcription factor (AS2/LOB) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR004883 LOB 9 106
No external refs found!