Aliases : NHX2, ATNHX2, LOC_Os11g42790
Description : proton:sodium cation antiporter (NHX)
Gene families : OG0000899 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000899_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | HRR: LOC_Os11g42790.1 | |
Cluster | HCCA: Cluster_145 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
AMTR_s00025p00134170 | AT-NHX1, ATNHX1,... | Solute transport.carrier-mediated transport.CPA... | 0.03 | OrthoFinder output from all 47 species | |
Als_g10801 | AT-NHX1, ATNHX1,... | proton:sodium cation antiporter *(NHX) & original... | 0.02 | OrthoFinder output from all 47 species | |
Dcu_g40957 | AT-NHX1, ATNHX1,... | proton:sodium cation antiporter *(NHX) & original... | 0.03 | OrthoFinder output from all 47 species | |
Len_g56036 | NHX2, ATNHX2 | proton:sodium cation antiporter *(NHX) & original... | 0.03 | OrthoFinder output from all 47 species | |
Sam_g26642 | No alias | proton:sodium cation antiporter *(NHX) & original... | 0.02 | OrthoFinder output from all 47 species | |
Solyc01g067710.3.1 | NHX2, ATNHX2,... | proton:sodium cation antiporter (NHX) | 0.03 | OrthoFinder output from all 47 species |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
BP | GO:0006812 | monoatomic cation transport | IEA | Interproscan |
MF | GO:0015299 | obsolete solute:proton antiporter activity | IEA | Interproscan |
BP | GO:0055085 | transmembrane transport | IEA | Interproscan |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0003674 | molecular_function | IEP | HCCA |
MF | GO:0003723 | RNA binding | IEP | HCCA |
MF | GO:0004518 | nuclease activity | IEP | HCCA |
MF | GO:0005488 | binding | IEP | HCCA |
MF | GO:0019842 | vitamin binding | IEP | HCCA |
MF | GO:0030170 | pyridoxal phosphate binding | IEP | HCCA |
MF | GO:0070279 | vitamin B6 binding | IEP | HCCA |
MF | GO:0097159 | organic cyclic compound binding | IEP | HCCA |
MF | GO:1901363 | heterocyclic compound binding | IEP | HCCA |
InterPro domains | Description | Start | Stop |
---|---|---|---|
IPR006153 | Cation/H_exchanger | 26 | 443 |
No external refs found! |