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  5. LOC_Os11g42080.1

LOC_Os11g42080.1 (LOC_Os11g42080)


Aliases : LOC_Os11g42080

Description : no hits & (original description: none)


Gene families : OG0000989 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000989_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os11g42080.1
Cluster HCCA: Cluster_82

Target Alias Description ECC score Gene Family Method Actions
AT5G45530 No alias Protein of unknown function (DUF594) 0.06 OrthoFinder output from all 47 species
Ala_g34202 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g19777 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ceric.27G066800.1 Ceric.27G066800 not classified & original description: pacid=50605337... 0.03 OrthoFinder output from all 47 species
GSVIVT01014447001 No alias No description available 0.04 OrthoFinder output from all 47 species
GSVIVT01014448001 No alias No description available 0.04 OrthoFinder output from all 47 species
GSVIVT01014449001 No alias No description available 0.03 OrthoFinder output from all 47 species
GSVIVT01014456001 No alias No description available 0.03 OrthoFinder output from all 47 species
GSVIVT01015712001 No alias No description available 0.04 OrthoFinder output from all 47 species
Gb_18623 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Gb_26934 No alias no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
LOC_Os01g58500.1 LOC_Os01g58500 no hits & (original description: none) 0.06 OrthoFinder output from all 47 species
LOC_Os01g72380.1 LOC_Os01g72380 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
LOC_Os04g06900.1 LOC_Os04g06900 no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
LOC_Os08g09570.1 LOC_Os08g09570 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
LOC_Os08g11500.1 LOC_Os08g11500 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
LOC_Os12g08650.1 LOC_Os12g08650 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
LOC_Os12g21940.1 LOC_Os12g21940 no hits & (original description: none) 0.07 OrthoFinder output from all 47 species
Nbi_g03106 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g36506 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Solyc12g094650.3.1 Solyc12g094650 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Zm00001e040439_P001 Zm00001e040439 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP HCCA
MF GO:0003674 molecular_function IEP HCCA
MF GO:0004672 protein kinase activity IEP HCCA
MF GO:0005488 binding IEP HCCA
MF GO:0005524 ATP binding IEP HCCA
BP GO:0006468 protein phosphorylation IEP HCCA
BP GO:0006793 phosphorus metabolic process IEP HCCA
BP GO:0006796 phosphate-containing compound metabolic process IEP HCCA
MF GO:0016301 kinase activity IEP HCCA
BP GO:0016310 phosphorylation IEP HCCA
MF GO:0016701 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen IEP HCCA
MF GO:0016702 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen IEP HCCA
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP HCCA
MF GO:0016773 phosphotransferase activity, alcohol group as acceptor IEP HCCA
MF GO:0017076 purine nucleotide binding IEP HCCA
MF GO:0030554 adenyl nucleotide binding IEP HCCA
MF GO:0032553 ribonucleotide binding IEP HCCA
MF GO:0032555 purine ribonucleotide binding IEP HCCA
MF GO:0032559 adenyl ribonucleotide binding IEP HCCA
MF GO:0035639 purine ribonucleoside triphosphate binding IEP HCCA
MF GO:0036094 small molecule binding IEP HCCA
BP GO:0036211 protein modification process IEP HCCA
MF GO:0043167 ion binding IEP HCCA
MF GO:0043168 anion binding IEP HCCA
BP GO:0043412 macromolecule modification IEP HCCA
MF GO:0043531 ADP binding IEP HCCA
MF GO:0051213 dioxygenase activity IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:0097367 carbohydrate derivative binding IEP HCCA
MF GO:1901265 nucleoside phosphate binding IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
InterPro domains Description Start Stop
IPR025315 DUF4220 49 398
IPR007658 DUF594 662 712
No external refs found!