LOC_Os11g41890.1 (LOC_Os11g41890)


Aliases : LOC_Os11g41890

Description : Heterogeneous nuclear ribonucleoprotein 1 OS=Arabidopsis thaliana (sp|q8w034|rnp1_arath : 208.0)


Gene families : OG0000120 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000120_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os11g41890.1

Target Alias Description ECC score Gene Family Method Actions
Aob_g26376 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene65159.t1 Aspi01Gene65159 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g19823 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ceric.03G048000.1 Ceric.03G048000 not classified & original description: pacid=50572345... 0.03 OrthoFinder output from all 47 species
Ceric.28G061700.1 Ceric.28G061700 not classified & original description: pacid=50569499... 0.05 OrthoFinder output from all 47 species
Cpa|evm.model.tig00020912.27 No alias Heterogeneous nuclear ribonucleoprotein 1 OS=Arabidopsis thaliana 0.01 OrthoFinder output from all 47 species
GSVIVT01032402001 No alias Heterogeneous nuclear ribonucleoprotein 1 OS=Arabidopsis thaliana 0.04 OrthoFinder output from all 47 species
Len_g02263 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g11176 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g07384 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g20677 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g42376 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g42383 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g43581 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g52022 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEA Interproscan
Type GO Term Name Evidence Source
MF GO:0003824 catalytic activity IEP HCCA
BP GO:0005975 carbohydrate metabolic process IEP HCCA
BP GO:0008150 biological_process IEP HCCA
MF GO:0016853 isomerase activity IEP HCCA
MF GO:0016866 intramolecular transferase activity IEP HCCA
MF GO:0016868 intramolecular transferase activity, phosphotransferases IEP HCCA
BP GO:0019725 cellular homeostasis IEP HCCA
BP GO:0042592 homeostatic process IEP HCCA
BP GO:0045454 cell redox homeostasis IEP HCCA
InterPro domains Description Start Stop
IPR000504 RRM_dom 8 66
IPR000504 RRM_dom 108 165
No external refs found!