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  5. LOC_Os11g41880.1

LOC_Os11g41880.1 (OBE1, LOC_Os11g41880)


Aliases : OBE1, LOC_Os11g41880

Description : OBERON-like protein OS=Nicotiana benthamiana (sp|q84n38|pvip_nicbe : 275.0)


Gene families : OG0000521 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000521_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os11g41880.1
Cluster HCCA: Cluster_141

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00024p00014560 evm_27.TU.AmTr_v1... Protein OBERON 3 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
Adi_g026102 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene72655.t1 OBE1, Aspi01Gene72655 transcriptional co-regulator *(Oberon) & original... 0.03 OrthoFinder output from all 47 species
Ceric.11G039400.1 OBE2, Ceric.11G039400 transcriptional co-regulator *(Oberon) & original... 0.02 OrthoFinder output from all 47 species
Dde_g11096 No alias transcriptional co-regulator *(Oberon) & original... 0.02 OrthoFinder output from all 47 species
Ehy_g03782 OBE2 transcriptional co-regulator *(Oberon) & original... 0.02 OrthoFinder output from all 47 species
Gb_21164 No alias Protein OBERON 4 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
Pnu_g24330 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0007.g003758 No alias transcriptional co-regulator *(Oberon) & original... 0.03 OrthoFinder output from all 47 species
Zm00001e038618_P001 Zm00001e038618 no description available(sp|q10pc5|tta1_orysj : 941.0) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0005506 iron ion binding IEP HCCA
BP GO:0005984 disaccharide metabolic process IEP HCCA
BP GO:0005985 sucrose metabolic process IEP HCCA
BP GO:0006950 response to stress IEP HCCA
BP GO:0006952 defense response IEP HCCA
BP GO:0009311 oligosaccharide metabolic process IEP HCCA
MF GO:0016157 sucrose synthase activity IEP HCCA
MF GO:0016491 oxidoreductase activity IEP HCCA
MF GO:0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen IEP HCCA
MF GO:0020037 heme binding IEP HCCA
MF GO:0035251 UDP-glucosyltransferase activity IEP HCCA
MF GO:0046527 glucosyltransferase activity IEP HCCA
MF GO:0046906 tetrapyrrole binding IEP HCCA
BP GO:0050896 response to stimulus IEP HCCA
BP GO:0055114 obsolete oxidation-reduction process IEP HCCA
CC GO:0110165 cellular anatomical entity IEP HCCA
InterPro domains Description Start Stop
IPR032881 Oberon_PHD 164 287
No external refs found!