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LOC_Os11g41140.1 (LOC_Os11g41140)


Aliases : LOC_Os11g41140

Description : E3 ubiquitin-protein ligase At3g02290 OS=Arabidopsis thaliana (sp|q8le94|ring3_arath : 149.0)


Gene families : OG0000856 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000856_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os11g41140.1
Cluster HCCA: Cluster_311

Target Alias Description ECC score Gene Family Method Actions
AT5G38895 No alias RING/U-box superfamily protein 0.05 OrthoFinder output from all 47 species
Dde_g02132 RHB1A E3 ubiquitin ligase *(AIRP1) & original description: none 0.01 OrthoFinder output from all 47 species
Pnu_g03008 No alias E3 ubiquitin ligase *(AIRP1) & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g06243 RHB1A E3 ubiquitin ligase *(AIRP1) & original description: none 0.01 OrthoFinder output from all 47 species
Spa_g15851 No alias E3 ubiquitin ligase *(AIRP1) & original description: none 0.04 OrthoFinder output from all 47 species
Zm00001e002639_P004 RHB1A, Zm00001e002639 Probable E3 ubiquitin-protein ligase RHB1A... 0.02 OrthoFinder output from all 47 species
Zm00001e012916_P001 RHB1A, Zm00001e012916 Probable E3 ubiquitin-protein ligase RHB1A... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0005509 calcium ion binding IEP HCCA
InterPro domains Description Start Stop
IPR001841 Znf_RING 169 210
No external refs found!