LOC_Os02g42870.1


Description : transcription factor (MYB)


Gene families : OG_01_0000002 (Archaeplastida) Phylogenetic Tree(s): No tree available for this family ,
OG_02_0000002 (LandPlants) Phylogenetic Tree(s): No tree available for this family ,
OG_03_0002418 (SeedPlants) Phylogenetic Tree(s): OG_03_0002418_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os02g42870.1
Cluster HCCA: Cluster_239

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00010p00252990 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.MYB... 0.04 Archaeplastida
AMTR_s00019p00201260 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.MYB... 0.03 Archaeplastida
AMTR_s00030p00146410 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.MYB... 0.04 Archaeplastida
AMTR_s00045p00146180 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.MYB... 0.06 Archaeplastida
AMTR_s00048p00210040 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.MYB... 0.02 Archaeplastida
AMTR_s00109p00061950 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.MYB... 0.05 Archaeplastida
AT1G14350 AtMYB124, MYB124, FLP Duplicated homeodomain-like superfamily protein 0.04 Archaeplastida
AT1G16490 MYB58, ATMYB58 myb domain protein 58 0.03 Archaeplastida
AT1G17950 BW52, ATMYB52, MYB52 myb domain protein 52 0.03 Archaeplastida
AT1G25340 MYB116, AtMYB116 myb domain protein 116 0.03 Archaeplastida
AT1G26780 AtMYB117, LOF1, MYB117 myb domain protein 117 0.03 Archaeplastida
AT1G63910 MYB103, AtMYB103 myb domain protein 103 0.03 Archaeplastida
AT1G68320 BW62B, BW62C,... myb domain protein 62 0.02 Archaeplastida
AT1G79180 ATMYB63, MYB63 myb domain protein 63 0.03 Archaeplastida
AT2G47190 MYB2, ATMYB2 myb domain protein 2 0.03 Archaeplastida
AT3G01140 MYB106, NOK, AtMYB106 myb domain protein 106 0.05 Archaeplastida
AT3G08500 AtMYB83, MYB83 myb domain protein 83 0.02 Archaeplastida
AT3G13540 ATMYB5, MYB5 myb domain protein 5 0.03 Archaeplastida
AT3G27785 PGA37, ATMYB118, MYB118 myb domain protein 118 0.02 Archaeplastida
AT3G47600 ATMYB94, ATMYBCP70, MYB94 myb domain protein 94 0.04 Archaeplastida
AT3G48920 MYB45, AtMYB45 myb domain protein 45 0.02 Archaeplastida
AT3G49690 MYB84, RAX3, ATMYB84 myb domain protein 84 0.05 Archaeplastida
AT3G53200 AtMYB27, MYB27 myb domain protein 27 0.02 Archaeplastida
AT3G61250 AtMYB17, MYB17 myb domain protein 17 0.04 Archaeplastida
AT4G09460 MYB6, AtMYB6 myb domain protein 6 0.03 Archaeplastida
AT4G21440 ATMYB102, ATM4, MYB102 MYB-like 102 0.02 Archaeplastida
AT4G22680 AtMYB85, MYB85 myb domain protein 85 0.03 Archaeplastida
AT4G33450 ATMYB69, MYB69 myb domain protein 69 0.03 Archaeplastida
AT5G10280 ATMYB64, ATMYB92, MYB92 myb domain protein 92 0.03 Archaeplastida
AT5G11510 AtMYB3R4, MYB3R-4 myb domain protein 3r-4 0.03 Archaeplastida
AT5G12870 ATMYB46, MYB46 myb domain protein 46 0.03 Archaeplastida
AT5G14340 AtMYB40, MYB40 myb domain protein 40 0.03 Archaeplastida
AT5G52260 MYB19, AtMYB19 myb domain protein 19 0.03 Archaeplastida
AT5G57620 MYB36, AtMYB36 myb domain protein 36 0.03 Archaeplastida
Cpa|evm.model.tig00021108.38 No alias RNA biosynthesis.transcriptional activation.MYB... 0.01 Archaeplastida
Cre07.g345350 No alias RNA biosynthesis.transcriptional activation.MYB... 0.01 Archaeplastida
GSVIVT01004317001 No alias RNA biosynthesis.transcriptional activation.MYB... 0.02 Archaeplastida
GSVIVT01008090001 No alias RNA biosynthesis.transcriptional activation.MYB... 0.02 Archaeplastida
GSVIVT01014770001 No alias RNA biosynthesis.transcriptional activation.MYB... 0.02 Archaeplastida
GSVIVT01015264001 No alias RNA biosynthesis.transcriptional activation.MYB... 0.03 Archaeplastida
GSVIVT01019410001 No alias RNA biosynthesis.transcriptional activation.MYB... 0.02 Archaeplastida
GSVIVT01019967001 No alias RNA biosynthesis.transcriptional activation.MYB... 0.03 Archaeplastida
GSVIVT01025269001 No alias RNA biosynthesis.transcriptional activation.MYB... 0.03 Archaeplastida
GSVIVT01026868001 No alias RNA biosynthesis.transcriptional activation.MYB... 0.05 Archaeplastida
GSVIVT01028235001 No alias RNA biosynthesis.transcriptional activation.MYB... 0.02 Archaeplastida
GSVIVT01029904001 No alias RNA biosynthesis.transcriptional activation.MYB... 0.03 Archaeplastida
GSVIVT01032088001 No alias RNA biosynthesis.transcriptional activation.MYB... 0.02 Archaeplastida
GSVIVT01035332001 No alias RNA biosynthesis.transcriptional activation.MYB... 0.03 Archaeplastida
GSVIVT01035463001 No alias RNA biosynthesis.transcriptional activation.MYB... 0.04 Archaeplastida
GSVIVT01035663001 No alias RNA biosynthesis.transcriptional activation.MYB... 0.02 Archaeplastida
Gb_02422 No alias transcription factor (MYB) 0.03 Archaeplastida
Gb_03400 No alias transcription factor (MYB) 0.02 Archaeplastida
Gb_05115 No alias transcription factor (MYB) 0.03 Archaeplastida
Gb_06298 No alias transcription factor (MYB) 0.04 Archaeplastida
Gb_29933 No alias transcription factor (MYB) 0.03 Archaeplastida
Gb_32143 No alias transcription factor (MYB) 0.03 Archaeplastida
Gb_34086 No alias transcription factor (MYB) 0.02 Archaeplastida
Gb_39852 No alias transcription factor (MYB) 0.02 Archaeplastida
Gb_40065 No alias transcription factor (MYB) 0.03 Archaeplastida
LOC_Os01g16810.1 No alias transcription factor (MYB) 0.04 Archaeplastida
LOC_Os05g46610.1 No alias transcription factor (MYB) 0.04 Archaeplastida
LOC_Os08g33800.1 No alias transcription factor (MYB) 0.06 Archaeplastida
LOC_Os09g24800.1 No alias transcription factor (MYB) 0.03 Archaeplastida
MA_10435612g0010 No alias transcription factor (MYB) 0.05 Archaeplastida
MA_128244g0010 No alias transcription factor (MYB) 0.03 Archaeplastida
MA_139238g0010 No alias transcription factor (MYB) 0.02 Archaeplastida
MA_14204g0010 No alias transcription factor (MYB) 0.02 Archaeplastida
MA_7091g0010 No alias transcription factor (MYB) 0.02 Archaeplastida
MA_83918g0010 No alias transcription factor (MYB) 0.03 Archaeplastida
MA_9483804g0010 No alias transcription factor (MYB) 0.03 Archaeplastida
Mp2g22560.1 No alias transcription factor (MYB) 0.02 Archaeplastida
Mp7g16300.1 No alias transcription factor (MYB) 0.02 Archaeplastida
Pp3c12_10360V3.1 No alias myb domain protein 105 0.02 Archaeplastida
Pp3c17_19947V3.1 No alias myb domain protein 88 0.02 Archaeplastida
Pp3c17_7730V3.1 No alias myb domain protein 55 0.02 Archaeplastida
Pp3c2_37040V3.1 No alias myb domain protein 106 0.02 Archaeplastida
Smo80553 No alias RNA biosynthesis.transcriptional activation.MYB... 0.02 Archaeplastida
Smo84195 No alias RNA biosynthesis.transcriptional activation.MYB... 0.02 Archaeplastida
Solyc01g005660.3.1 No alias transcription factor (MYB) 0.03 Archaeplastida
Solyc01g087130.4.1 No alias transcription factor (MYB) 0.03 Archaeplastida
Solyc01g094360.3.1 No alias transcription factor (MYB) 0.07 Archaeplastida
Solyc01g102340.3.1 No alias transcription factor (MYB) 0.05 Archaeplastida
Solyc02g067760.4.1 No alias transcription factor (MYB) 0.04 Archaeplastida
Solyc03g005570.3.1 No alias transcription factor (MYB) 0.02 Archaeplastida
Solyc03g112390.3.1 No alias transcription factor (MYB) 0.03 Archaeplastida
Solyc04g005600.3.1 No alias transcription factor (MYB) 0.02 Archaeplastida
Solyc04g005710.3.1 No alias transcription factor (MYB) 0.03 Archaeplastida
Solyc05g007690.2.1 No alias transcription factor (MYB) 0.03 Archaeplastida
Solyc05g007710.3.1 No alias transcription factor (MYB) 0.04 Archaeplastida
Solyc05g007870.3.1 No alias transcription factor (MYB) 0.08 Archaeplastida
Solyc05g048830.3.1 No alias transcription factor (MYB) 0.07 Archaeplastida
Solyc06g009710.4.1 No alias no hits & (original description: none) 0.03 Archaeplastida
Solyc07g006750.3.1 No alias transcription factor (MYB) 0.03 Archaeplastida
Solyc07g008010.4.1 No alias transcription factor (MYB) 0.04 Archaeplastida
Solyc08g080580.4.1 No alias transcription factor (MYB) 0.02 Archaeplastida
Solyc08g081500.3.1 No alias transcription factor (MYB) 0.03 Archaeplastida
Zm00001e015239_P001 No alias transcription factor (MYB) 0.08 Archaeplastida
Zm00001e016403_P001 No alias no hits & (original description: none) 0.03 Archaeplastida
Zm00001e017428_P003 No alias transcription factor (MYB) 0.04 Archaeplastida
Zm00001e020044_P001 No alias transcription factor (MYB) 0.05 Archaeplastida
Zm00001e023277_P001 No alias transcription factor (MYB) 0.02 Archaeplastida
Zm00001e026426_P001 No alias transcription factor (MYB) 0.02 Archaeplastida
Zm00001e027531_P001 No alias transcription factor (MYB) 0.05 Archaeplastida
Zm00001e028135_P001 No alias transcription factor (MYB) 0.02 Archaeplastida
Zm00001e031356_P001 No alias transcription factor (MYB) 0.03 Archaeplastida
Zm00001e032298_P001 No alias transcription factor (MYB) 0.03 Archaeplastida
Zm00001e037956_P001 No alias transcription factor (MYB) 0.02 Archaeplastida
Zm00001e040384_P001 No alias transcription factor (MYB) 0.02 Archaeplastida
AMTR_s00024p00224470 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.MYB... 0.01 LandPlants
AMTR_s00030p00146410 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.MYB... 0.04 LandPlants
AMTR_s00037p00177500 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.MYB... 0.01 LandPlants
AMTR_s00045p00146180 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.MYB... 0.03 LandPlants
AT1G25340 MYB116, AtMYB116 myb domain protein 116 0.02 LandPlants
AT1G35515 MYB8, HOS10 high response to osmotic stress 10 0.02 LandPlants
AT1G63910 MYB103, AtMYB103 myb domain protein 103 0.03 LandPlants
AT1G68320 BW62B, BW62C,... myb domain protein 62 0.02 LandPlants
AT2G36890 ATMYB38, MYB38,... Duplicated homeodomain-like superfamily protein 0.02 LandPlants
AT2G47190 MYB2, ATMYB2 myb domain protein 2 0.03 LandPlants
AT3G01140 MYB106, NOK, AtMYB106 myb domain protein 106 0.04 LandPlants
AT3G47600 ATMYB94, ATMYBCP70, MYB94 myb domain protein 94 0.04 LandPlants
AT3G49690 MYB84, RAX3, ATMYB84 myb domain protein 84 0.03 LandPlants
AT3G61250 AtMYB17, MYB17 myb domain protein 17 0.03 LandPlants
AT3G62610 ATMYB11, PFG2, MYB11 myb domain protein 11 0.02 LandPlants
AT4G12350 AtMYB42, MYB42 myb domain protein 42 0.02 LandPlants
AT4G22680 AtMYB85, MYB85 myb domain protein 85 0.03 LandPlants
AT5G12870 ATMYB46, MYB46 myb domain protein 46 0.02 LandPlants
AT5G14340 AtMYB40, MYB40 myb domain protein 40 0.03 LandPlants
AT5G49330 PFG3, ATMYB111, MYB111 myb domain protein 111 0.02 LandPlants
AT5G57620 MYB36, AtMYB36 myb domain protein 36 0.03 LandPlants
GSVIVT01008090001 No alias RNA biosynthesis.transcriptional activation.MYB... 0.02 LandPlants
GSVIVT01014770001 No alias RNA biosynthesis.transcriptional activation.MYB... 0.02 LandPlants
GSVIVT01015264001 No alias RNA biosynthesis.transcriptional activation.MYB... 0.02 LandPlants
GSVIVT01019410001 No alias RNA biosynthesis.transcriptional activation.MYB... 0.02 LandPlants
GSVIVT01025269001 No alias RNA biosynthesis.transcriptional activation.MYB... 0.02 LandPlants
GSVIVT01026868001 No alias RNA biosynthesis.transcriptional activation.MYB... 0.03 LandPlants
GSVIVT01029904001 No alias RNA biosynthesis.transcriptional activation.MYB... 0.03 LandPlants
GSVIVT01032564001 No alias RNA biosynthesis.transcriptional activation.MYB... 0.02 LandPlants
GSVIVT01033418001 No alias RNA biosynthesis.transcriptional activation.MYB... 0.02 LandPlants
GSVIVT01035463001 No alias RNA biosynthesis.transcriptional activation.MYB... 0.03 LandPlants
Gb_02422 No alias transcription factor (MYB) 0.02 LandPlants
Gb_03400 No alias transcription factor (MYB) 0.02 LandPlants
Gb_05115 No alias transcription factor (MYB) 0.03 LandPlants
Gb_09998 No alias transcription factor (MYB) 0.02 LandPlants
Gb_29789 No alias transcription factor (MYB) 0.02 LandPlants
Gb_29933 No alias transcription factor (MYB) 0.03 LandPlants
Gb_39852 No alias transcription factor (MYB) 0.02 LandPlants
Gb_40065 No alias transcription factor (MYB) 0.02 LandPlants
LOC_Os05g46610.1 No alias transcription factor (MYB) 0.03 LandPlants
MA_128244g0010 No alias transcription factor (MYB) 0.03 LandPlants
MA_7091g0010 No alias transcription factor (MYB) 0.02 LandPlants
MA_83918g0010 No alias transcription factor (MYB) 0.03 LandPlants
MA_9381481g0010 No alias transcription factor (MYB) 0.02 LandPlants
MA_9483804g0010 No alias transcription factor (MYB) 0.02 LandPlants
Mp2g22560.1 No alias transcription factor (MYB) 0.02 LandPlants
Smo84195 No alias RNA biosynthesis.transcriptional activation.MYB... 0.02 LandPlants
Solyc01g005660.3.1 No alias transcription factor (MYB) 0.03 LandPlants
Solyc01g087130.4.1 No alias transcription factor (MYB) 0.02 LandPlants
Solyc01g094360.3.1 No alias transcription factor (MYB) 0.06 LandPlants
Solyc01g102340.3.1 No alias transcription factor (MYB) 0.03 LandPlants
Solyc02g067760.4.1 No alias transcription factor (MYB) 0.04 LandPlants
Solyc03g005570.3.1 No alias transcription factor (MYB) 0.02 LandPlants
Solyc03g025870.3.1 No alias transcription factor (MYB) 0.02 LandPlants
Solyc03g112390.3.1 No alias transcription factor (MYB) 0.03 LandPlants
Solyc04g005600.3.1 No alias transcription factor (MYB) 0.02 LandPlants
Solyc05g007710.3.1 No alias transcription factor (MYB) 0.03 LandPlants
Solyc05g048830.3.1 No alias transcription factor (MYB) 0.05 LandPlants
Solyc07g006750.3.1 No alias transcription factor (MYB) 0.02 LandPlants
Solyc08g081500.3.1 No alias transcription factor (MYB) 0.03 LandPlants
Zm00001e015239_P001 No alias transcription factor (MYB) 0.07 LandPlants
Zm00001e017428_P003 No alias transcription factor (MYB) 0.04 LandPlants
Zm00001e020044_P001 No alias transcription factor (MYB) 0.04 LandPlants
Zm00001e026426_P001 No alias transcription factor (MYB) 0.02 LandPlants
Zm00001e027531_P001 No alias transcription factor (MYB) 0.05 LandPlants
Zm00001e028135_P001 No alias transcription factor (MYB) 0.02 LandPlants
Zm00001e032298_P001 No alias transcription factor (MYB) 0.02 LandPlants
Zm00001e037956_P001 No alias transcription factor (MYB) 0.02 LandPlants
Zm00001e038356_P001 No alias transcription factor (MYB) 0.02 LandPlants
Zm00001e039756_P002 No alias no hits & (original description: none) 0.02 LandPlants
Zm00001e040384_P001 No alias transcription factor (MYB) 0.02 LandPlants
AT3G61250 AtMYB17, MYB17 myb domain protein 17 0.02 SeedPlants
MA_128244g0010 No alias transcription factor (MYB) 0.02 SeedPlants
Solyc01g094360.3.1 No alias transcription factor (MYB) 0.04 SeedPlants
Solyc05g048830.3.1 No alias transcription factor (MYB) 0.06 SeedPlants
Zm00001e015239_P001 No alias transcription factor (MYB) 0.04 SeedPlants

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR001005 SANT/Myb 67 112
IPR001005 SANT/Myb 14 61
No external refs found!