LOC_Os11g38980.1 (LOC_Os11g38980)


Aliases : LOC_Os11g38980

Description : F-box/kelch-repeat protein SKIP11 OS=Arabidopsis thaliana (sp|q8l736|ski11_arath : 411.0)


Gene families : OG0000497 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000497_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os11g38980.1
Cluster HCCA: Cluster_174

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00010p00255050 evm_27.TU.AmTr_v1... F-box/kelch-repeat protein SKIP11 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
AMTR_s00175p00042660 evm_27.TU.AmTr_v1... F-box/kelch-repeat protein At5g60570 OS=Arabidopsis thaliana 0.04 OrthoFinder output from all 47 species
AT1G14330 No alias Galactose oxidase/kelch repeat superfamily protein 0.04 OrthoFinder output from all 47 species
AT2G02870 No alias Galactose oxidase/kelch repeat superfamily protein 0.03 OrthoFinder output from all 47 species
Adi_g017957 No alias substrate adaptor *(ARKP1) of SCF E3 ubiquitin ligase... 0.02 OrthoFinder output from all 47 species
Adi_g021774 No alias substrate adaptor *(ARKP1) of SCF E3 ubiquitin ligase... 0.02 OrthoFinder output from all 47 species
Adi_g021775 No alias substrate adaptor *(ARKP1) of SCF E3 ubiquitin ligase... 0.02 OrthoFinder output from all 47 species
Adi_g056279 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g080527 No alias substrate adaptor *(ARKP1) of SCF E3 ubiquitin ligase... 0.02 OrthoFinder output from all 47 species
Aev_g17220 No alias substrate adaptor *(ARKP1) of SCF E3 ubiquitin ligase... 0.02 OrthoFinder output from all 47 species
Als_g22754 No alias substrate adaptor *(ARKP1) of SCF E3 ubiquitin ligase... 0.05 OrthoFinder output from all 47 species
Aob_g07345 No alias substrate adaptor *(ARKP1) of SCF E3 ubiquitin ligase... 0.03 OrthoFinder output from all 47 species
Aob_g07885 No alias substrate adaptor *(ARKP1) of SCF E3 ubiquitin ligase... 0.03 OrthoFinder output from all 47 species
Azfi_s0179.g056297 No alias substrate adaptor *(ARKP1) of SCF E3 ubiquitin ligase... 0.04 OrthoFinder output from all 47 species
Dcu_g09529 No alias substrate adaptor *(ARKP1) of SCF E3 ubiquitin ligase... 0.04 OrthoFinder output from all 47 species
Ehy_g04885 No alias substrate adaptor *(ARKP1) of SCF E3 ubiquitin ligase... 0.03 OrthoFinder output from all 47 species
Ehy_g06855 No alias substrate adaptor *(ARKP1) of SCF E3 ubiquitin ligase... 0.02 OrthoFinder output from all 47 species
Ehy_g15525 No alias substrate adaptor *(ARKP1) of SCF E3 ubiquitin ligase... 0.02 OrthoFinder output from all 47 species
GSVIVT01020023001 No alias F-box/kelch-repeat protein SKIP11 OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
MA_567306g0010 No alias F-box/kelch-repeat protein At5g60570 OS=Arabidopsis... 0.02 OrthoFinder output from all 47 species
MA_9299g0010 No alias F-box/kelch-repeat protein At3g27150 OS=Arabidopsis... 0.04 OrthoFinder output from all 47 species
Mp4g10310.1 No alias F-box/kelch-repeat protein SKIP11 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
Smo14013 No alias F-box/kelch-repeat protein At3g27150 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
Spa_g06022 No alias substrate adaptor *(ARKP1) of SCF E3 ubiquitin ligase... 0.03 OrthoFinder output from all 47 species
Zm00001e021211_P001 Zm00001e021211 F-box/kelch-repeat protein At1g26930 OS=Arabidopsis... 0.02 OrthoFinder output from all 47 species
Zm00001e023895_P005 Zm00001e023895 F-box/kelch-repeat protein At1g74510 OS=Arabidopsis... 0.04 OrthoFinder output from all 47 species
Zm00001e038898_P001 Zm00001e038898 F-box/kelch-repeat protein SKIP11 OS=Arabidopsis... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR006652 Kelch_1 223 268
IPR006652 Kelch_1 270 316
No external refs found!