LOC_Os11g38900.1 (SUVH3, SDG19, LOC_Os11g38900)

Aliases : SUVH3, SDG19, LOC_Os11g38900

Description : class V/Su(var) histone methyltransferase component of histone lysine methylation/demethylation. methylated DNA binding component SUVH1/3 of SUVH-DNAJ methylation reader complex

Gene families : OG0000291 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000291_tree

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: LOC_Os11g38900.1

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00002p00271340	SDG33, SUVH4,...	Enzyme classification.EC_2 transferases.EC_2.1...	0.02	OrthoFinder output from all 47 species
AT5G04940	SUVH1	SU(VAR)3-9 homolog 1	0.02	OrthoFinder output from all 47 species
Adi_g012366	SDG23, SUVH6	EC_2.1 transferase transferring one-carbon group &...	0.04	OrthoFinder output from all 47 species
Adi_g055363	SDG33, SUVH4, KYP	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Adi_g058771	SDG23, SUVH6	EC_2.1 transferase transferring one-carbon group &...	0.02	OrthoFinder output from all 47 species
Adi_g112672	SUVH3, SDG19	EC_2.1 transferase transferring one-carbon group &...	0.02	OrthoFinder output from all 47 species
Aev_g06142	SUVH1	EC_2.1 transferase transferring one-carbon group &...	0.02	OrthoFinder output from all 47 species
Aev_g14466	SDG33, SUVH4, KYP	EC_2.1 transferase transferring one-carbon group &...	0.03	OrthoFinder output from all 47 species
Aob_g03499	SUVH3, SDG19	EC_2.1 transferase transferring one-carbon group &...	0.02	OrthoFinder output from all 47 species
Aop_g06509	SUVH1	EC_2.1 transferase transferring one-carbon group &...	0.02	OrthoFinder output from all 47 species
Cba_g05945	SUVH1	EC_2.1 transferase transferring one-carbon group &...	0.02	OrthoFinder output from all 47 species
Ceric.13G012400.1	SDG23, SUVH6,...	not classified & original description: pacid=50636550...	0.03	OrthoFinder output from all 47 species
Cre02.g089200	SDG23, SUVH6	Histone-lysine N-methyltransferase, H3 lysine-9 specific...	0.02	OrthoFinder output from all 47 species
Dac_g23404	SUVH1	EC_2.1 transferase transferring one-carbon group &...	0.04	OrthoFinder output from all 47 species
Dcu_g09734	SDG23, SUVH6	EC_2.1 transferase transferring one-carbon group &...	0.02	OrthoFinder output from all 47 species
Ehy_g07008	ATSUVH2, SDG3, SUVH2	EC_2.1 transferase transferring one-carbon group &...	0.02	OrthoFinder output from all 47 species
Ehy_g14200	SUVH1	EC_2.1 transferase transferring one-carbon group &...	0.03	OrthoFinder output from all 47 species
GSVIVT01005913001	SUVH5, SGD9	Chromatin organisation.histone modifications.histone...	0.02	OrthoFinder output from all 47 species
Gb_22168	SUVH5, SGD9	class V/Su(var) histone methyltransferase component of...	0.03	OrthoFinder output from all 47 species
Gb_40999	SUVH1	class V/Su(var) histone methyltransferase component of...	0.03	OrthoFinder output from all 47 species
Gb_41440	SUVH5, SGD9	class V/Su(var) histone methyltransferase component of...	0.02	OrthoFinder output from all 47 species
Len_g01432	No alias	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Lfl_g02390	SUVH3, SDG19	EC_2.1 transferase transferring one-carbon group &...	0.03	OrthoFinder output from all 47 species
MA_54295g0010	SUVH1	class V/Su(var) histone methyltransferase component of...	0.02	OrthoFinder output from all 47 species
MA_95753g0010	SDG23, SUVH6	class V/Su(var) histone methyltransferase component of...	0.07	OrthoFinder output from all 47 species
Msp_g12366	SDG23, SUVH6	EC_2.1 transferase transferring one-carbon group &...	0.03	OrthoFinder output from all 47 species
Msp_g15602	SUVH1	EC_2.1 transferase transferring one-carbon group &...	0.02	OrthoFinder output from all 47 species
Msp_g26677	SDG33, SUVH4, KYP	EC_2.1 transferase transferring one-carbon group &...	0.02	OrthoFinder output from all 47 species
Ore_g16795	SDG33, SUVH4, KYP	EC_2.1 transferase transferring one-carbon group &...	0.04	OrthoFinder output from all 47 species
Ore_g19342	SUVH1	EC_2.1 transferase transferring one-carbon group &...	0.03	OrthoFinder output from all 47 species
Ore_g19713	SDG23, SUVH6	EC_2.1 transferase transferring one-carbon group &...	0.05	OrthoFinder output from all 47 species
Ore_g35203	SUVH1	EC_2.1 transferase transferring one-carbon group &...	0.03	OrthoFinder output from all 47 species
Pir_g26465	ATSUVH2, SDG3, SUVH2	EC_2.1 transferase transferring one-carbon group &...	0.02	OrthoFinder output from all 47 species
Pp3c4_9720V3.1	SDG33, SUVH4,...	SU(VAR)3-9 homolog 4	0.01	OrthoFinder output from all 47 species
Sam_g04985	No alias	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Sam_g06734	No alias	EC_2.1 transferase transferring one-carbon group &...	0.02	OrthoFinder output from all 47 species
Solyc09g082050.4.1	SUVH1, Solyc09g082050	class V/Su(var) histone methyltransferase component of...	0.02	OrthoFinder output from all 47 species
Solyc10g077070.2.1	SUVH3, SDG19,...	class V/Su(var) histone methyltransferase component of...	0.04	OrthoFinder output from all 47 species
Solyc12g096990.2.1	SET22, SDG22,...	class V/Su(var) histone methyltransferase component of...	0.02	OrthoFinder output from all 47 species
Tin_g10322	SUVH1	EC_2.1 transferase transferring one-carbon group &...	0.02	OrthoFinder output from all 47 species
Zm00001e009564_P001	ATSUVH2, SDG3,...	class V/Su(var) histone methyltransferase component of...	0.04	OrthoFinder output from all 47 species
Zm00001e033130_P002	SUVH3, SDG19,...	class V/Su(var) histone methyltransferase component of...	0.07	OrthoFinder output from all 47 species
Zm00001e033937_P001	Zm00001e033937	no hits & (original description: none)	0.02	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003677	DNA binding	IEA	Interproscan
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0005515	protein binding	IEA	Interproscan
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005634	nucleus	IEA	Interproscan
BP	GO:0006479	protein methylation	None	Extended
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
MF	GO:0008168	methyltransferase activity	None	Extended
MF	GO:0008170	N-methyltransferase activity	None	Extended
BP	GO:0008213	protein alkylation	None	Extended
MF	GO:0008270	zinc ion binding	IEA	Interproscan
MF	GO:0008276	protein methyltransferase activity	None	Extended
MF	GO:0008757	S-adenosylmethionine-dependent methyltransferase activity	None	Extended
BP	GO:0009987	cellular process	None	Extended
MF	GO:0016278	lysine N-methyltransferase activity	None	Extended
MF	GO:0016279	protein-lysine N-methyltransferase activity	None	Extended
BP	GO:0016570	histone modification	None	Extended
BP	GO:0016571	histone methylation	None	Extended
MF	GO:0016740	transferase activity	None	Extended
MF	GO:0016741	transferase activity, transferring one-carbon groups	None	Extended
BP	GO:0018022	peptidyl-lysine methylation	None	Extended
MF	GO:0018024	histone lysine N-methyltransferase activity	IEA	Interproscan
BP	GO:0018193	peptidyl-amino acid modification	None	Extended
BP	GO:0018205	peptidyl-lysine modification	None	Extended
BP	GO:0019538	protein metabolic process	None	Extended
BP	GO:0032259	methylation	None	Extended
BP	GO:0034968	histone lysine methylation	IEA	Interproscan
BP	GO:0036211	protein modification process	None	Extended
MF	GO:0042054	histone methyltransferase activity	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043169	cation binding	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
CC	GO:0043226	organelle	None	Extended
CC	GO:0043227	membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043231	intracellular membrane-bounded organelle	None	Extended
BP	GO:0043412	macromolecule modification	None	Extended
BP	GO:0043414	macromolecule methylation	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0044260	cellular macromolecule metabolic process	None	Extended
MF	GO:0046872	metal ion binding	None	Extended
MF	GO:0046914	transition metal ion binding	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended
MF	GO:0140096	catalytic activity, acting on a protein	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended
BP	GO:1901564	organonitrogen compound metabolic process	None	Extended

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Type	GO Term	Name	Evidence	Source
BP	GO:0016579	protein deubiquitination	IEP	HCCA
MF	GO:0042393	histone binding	IEP	HCCA
BP	GO:0070646	protein modification by small protein removal	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR017956	AT_hook_DNA-bd_motif	123	133
IPR017956	AT_hook_DNA-bd_motif	167	176
IPR017956	AT_hook_DNA-bd_motif	249	259
IPR017956	AT_hook_DNA-bd_motif	282	290
IPR017956	AT_hook_DNA-bd_motif	207	217
IPR001214	SET_dom	652	781
IPR003105	SRA_YDG	358	506
IPR007728	Pre-SET_dom	534	633

External Links

No external refs found!

LOC_Os11g38900.1 (SUVH3, SDG19, LOC_Os11g38900)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation