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  5. LOC_Os11g38260.1

LOC_Os11g38260.1 (FIB4, LOC_Os11g38260)


Aliases : FIB4, LOC_Os11g38260

Description : Plastid-lipid-associated protein 6, chloroplastic OS=Arabidopsis thaliana (sp|q9lw57|pap6_arath : 252.0)


Gene families : OG0008073 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0008073_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os11g38260.1
Cluster HCCA: Cluster_69

Target Alias Description ECC score Gene Family Method Actions
Aev_g02954 FIB4 Fibrillin plastoglobule core protein *(FBN4) & original... 0.02 OrthoFinder output from all 47 species
Aspi01Gene69313.t1 FIB4, Aspi01Gene69313 Fibrillin plastoglobule core protein *(FBN4) & original... 0.03 OrthoFinder output from all 47 species
Azfi_s0109.g045317 FIB4 Fibrillin plastoglobule core protein *(FBN4) & original... 0.03 OrthoFinder output from all 47 species
Dcu_g00596 FIB4 Fibrillin plastoglobule core protein *(FBN4) & original... 0.05 OrthoFinder output from all 47 species
GSVIVT01027851001 FIB4 Plastid-lipid-associated protein 6, chloroplastic... 0.02 OrthoFinder output from all 47 species
Ore_g04923 FIB4 Fibrillin plastoglobule core protein *(FBN4) & original... 0.03 OrthoFinder output from all 47 species
Pnu_g13704 FIB4 Fibrillin plastoglobule core protein *(FBN4) & original... 0.03 OrthoFinder output from all 47 species
Solyc09g090330.3.1 FIB4, Solyc09g090330 Plastid-lipid-associated protein 6, chloroplastic... 0.04 OrthoFinder output from all 47 species
Zm00001e011281_P001 FIB4, Zm00001e011281 Plastid-lipid-associated protein 6, chloroplastic... 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0005506 iron ion binding IEP HCCA
BP GO:0006790 sulfur compound metabolic process IEP HCCA
CC GO:0009507 chloroplast IEP HCCA
CC GO:0009521 photosystem IEP HCCA
CC GO:0009523 photosystem II IEP HCCA
CC GO:0009536 plastid IEP HCCA
BP GO:0015979 photosynthesis IEP HCCA
BP GO:0016226 iron-sulfur cluster assembly IEP HCCA
BP GO:0022607 cellular component assembly IEP HCCA
BP GO:0030163 protein catabolic process IEP HCCA
BP GO:0031163 metallo-sulfur cluster assembly IEP HCCA
MF GO:0043169 cation binding IEP HCCA
MF GO:0046872 metal ion binding IEP HCCA
MF GO:0046914 transition metal ion binding IEP HCCA
MF GO:0051536 iron-sulfur cluster binding IEP HCCA
MF GO:0051540 metal cluster binding IEP HCCA
BP GO:1901565 organonitrogen compound catabolic process IEP HCCA
InterPro domains Description Start Stop
IPR006843 PAP/fibrillin_dom 70 267
No external refs found!