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  5. LOC_Os11g37690.1

LOC_Os11g37690.1 (LOC_Os11g37690)


Aliases : LOC_Os11g37690

Description : RAB-GTPase-activating protein (RAB-GAP)


Gene families : OG0003830 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0003830_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os11g37690.1
Cluster HCCA: Cluster_174

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00004p00218000 evm_27.TU.AmTr_v1... Vesicle trafficking.regulation of membrane tethering and... 0.03 OrthoFinder output from all 47 species
AT2G20440 No alias Ypt/Rab-GAP domain of gyp1p superfamily protein 0.03 OrthoFinder output from all 47 species
AT4G28550 No alias Ypt/Rab-GAP domain of gyp1p superfamily protein 0.04 OrthoFinder output from all 47 species
Azfi_s0014.g013627 No alias Rab-GTPase-activating protein & original description: CDS=38-1303 0.03 OrthoFinder output from all 47 species
Ceric.28G036300.1 Ceric.28G036300 Rab-GTPase-activating protein & original description:... 0.1 OrthoFinder output from all 47 species
GSVIVT01001980001 No alias Vesicle trafficking.regulation of membrane tethering and... 0.02 OrthoFinder output from all 47 species
Len_g19411 No alias Rab-GTPase-activating protein & original description: none 0.02 OrthoFinder output from all 47 species
Pnu_g32441 No alias Rab GTPase-activating protein & original description: none 0.02 OrthoFinder output from all 47 species
Solyc10g006440.3.1 Solyc10g006440 RAB-GTPase-activating protein (RAB-GAP) 0.06 OrthoFinder output from all 47 species
Spa_g11865 No alias Rab-GTPase-activating protein & original description: none 0.02 OrthoFinder output from all 47 species
Zm00001e006461_P001 Zm00001e006461 RAB-GTPase-activating protein (RAB-GAP) 0.11 OrthoFinder output from all 47 species
Zm00001e010495_P001 Zm00001e010495 RAB-GTPase-activating protein (RAB-GAP) 0.05 OrthoFinder output from all 47 species
Zm00001e035132_P001 Zm00001e035132 RAB-GTPase-activating protein (RAB-GAP) 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004559 alpha-mannosidase activity IEP HCCA
MF GO:0004571 mannosyl-oligosaccharide 1,2-alpha-mannosidase activity IEP HCCA
MF GO:0004674 protein serine/threonine kinase activity IEP HCCA
MF GO:0004842 ubiquitin-protein transferase activity IEP HCCA
MF GO:0005488 binding IEP HCCA
BP GO:0006904 vesicle docking involved in exocytosis IEP HCCA
MF GO:0015923 mannosidase activity IEP HCCA
MF GO:0015924 mannosyl-oligosaccharide mannosidase activity IEP HCCA
MF GO:0016301 kinase activity IEP HCCA
BP GO:0016567 protein ubiquitination IEP HCCA
MF GO:0016740 transferase activity IEP HCCA
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP HCCA
MF GO:0019787 ubiquitin-like protein transferase activity IEP HCCA
BP GO:0022406 membrane docking IEP HCCA
BP GO:0032446 protein modification by small protein conjugation IEP HCCA
BP GO:0036211 protein modification process IEP HCCA
BP GO:0043412 macromolecule modification IEP HCCA
BP GO:0048278 vesicle docking IEP HCCA
BP GO:0051640 organelle localization IEP HCCA
BP GO:0070647 protein modification by small protein conjugation or removal IEP HCCA
BP GO:0140029 exocytic process IEP HCCA
BP GO:0140056 organelle localization by membrane tethering IEP HCCA
InterPro domains Description Start Stop
IPR000195 Rab-GTPase-TBC_dom 158 329
No external refs found!