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  5. AMTR_s00066p00023060

AMTR_s00066p00023060 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00066.4

Description : RNA processing.organelle machineries.RNA splicing.plastidial RNA splicing.group-II intron splicing.THA8 splicing factor


Gene families : OG_01_0000306 (Archaeplastida) Phylogenetic Tree(s): OG_01_0000306_tree ,
OG_02_0000732 (LandPlants) Phylogenetic Tree(s): OG_02_0000732_tree ,
OG_03_0002392 (SeedPlants) Phylogenetic Tree(s): OG_03_0002392_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00066p00023060
Cluster HCCA: Cluster_248

Target Alias Description ECC score Gene Family Method Actions
GSVIVT01023856001 No alias Protein THYLAKOID ASSEMBLY 8-like, chloroplastic... 0.03 Archaeplastida
Zm00001e010524_P001 No alias THA8 plastidial RNA splicing factor 0.02 Archaeplastida
GSVIVT01023856001 No alias Protein THYLAKOID ASSEMBLY 8-like, chloroplastic... 0.03 LandPlants
Zm00001e010524_P001 No alias THA8 plastidial RNA splicing factor 0.02 LandPlants
Zm00001e010524_P001 No alias THA8 plastidial RNA splicing factor 0.02 SeedPlants

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 149 196
No external refs found!