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  5. LOC_Os11g36430.3

LOC_Os11g36430.3 (RHF2A, LOC_Os11g36430)


Aliases : RHF2A, LOC_Os11g36430

Description : E3 ubiquitin-protein ligase RHF2A OS=Arabidopsis thaliana (sp|q9zt42|rhf2a_arath : 307.0)


Gene families : OG0001882 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001882_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os11g36430.3
Cluster HCCA: Cluster_174

Target Alias Description ECC score Gene Family Method Actions
AT5G22000 RHF2A RING-H2 group F2A 0.05 OrthoFinder output from all 47 species
Aob_g03171 RHF2A regulatory E3 ubiquitin ligase *(RHF) & original... 0.03 OrthoFinder output from all 47 species
Aop_g03148 RHF2A regulatory E3 ubiquitin ligase *(RHF) & original... 0.03 OrthoFinder output from all 47 species
Aspi01Gene17332.t1 RHF2A, Aspi01Gene17332 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Azfi_s0006.g009982 RHF2A regulatory E3 ubiquitin ligase *(RHF) & original... 0.03 OrthoFinder output from all 47 species
Azfi_s4053.g117827 RHF2A regulatory E3 ubiquitin ligase *(RHF) & original... 0.05 OrthoFinder output from all 47 species
Cba_g22945 RHF2A regulatory E3 ubiquitin ligase *(RHF) & original... 0.04 OrthoFinder output from all 47 species
Dde_g01414 RHF2A regulatory E3 ubiquitin ligase *(RHF) & original... 0.03 OrthoFinder output from all 47 species
Ehy_g09059 RHF2A regulatory E3 ubiquitin ligase *(RHF) & original... 0.03 OrthoFinder output from all 47 species
Ehy_g27084 RHF2A regulatory E3 ubiquitin ligase *(RHF) & original... 0.03 OrthoFinder output from all 47 species
GSVIVT01037523001 RHF2A Protein degradation.peptide tagging.Ubiquitin... 0.04 OrthoFinder output from all 47 species
Lfl_g29959 RHF2A regulatory E3 ubiquitin ligase *(RHF) & original... 0.02 OrthoFinder output from all 47 species
MA_10432852g0020 RHF2A E3 ubiquitin-protein ligase RHF2A OS=Arabidopsis... 0.02 OrthoFinder output from all 47 species
MA_35039g0010 RHF2A E3 ubiquitin-protein ligase RHF2A OS=Arabidopsis... 0.04 OrthoFinder output from all 47 species
MA_89641g0010 RHF2A no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Msp_g11714 RHF2A regulatory E3 ubiquitin ligase *(RHF) & original... 0.04 OrthoFinder output from all 47 species
Ore_g09917 RHF2A regulatory E3 ubiquitin ligase *(RHF) & original... 0.03 OrthoFinder output from all 47 species
Pir_g35780 No alias regulatory E3 ubiquitin ligase *(RHF) & original... 0.02 OrthoFinder output from all 47 species
Pp3c13_14240V3.1 RHF2A, Pp3c13_14240 RING-H2 group F2A 0.02 OrthoFinder output from all 47 species
Ppi_g15911 RHF2A regulatory E3 ubiquitin ligase *(RHF) & original... 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0213.g025975 RHF2A regulatory E3 ubiquitin ligase *(RHF) & original... 0.04 OrthoFinder output from all 47 species
Sam_g26741 No alias regulatory E3 ubiquitin ligase *(RHF) & original... 0.04 OrthoFinder output from all 47 species
Sam_g38301 No alias regulatory E3 ubiquitin ligase *(RHF) & original... 0.02 OrthoFinder output from all 47 species
Solyc06g073860.2.1 RHF2A, Solyc06g073860 E3 ubiquitin-protein ligase RHF2A OS=Arabidopsis... 0.06 OrthoFinder output from all 47 species
Solyc06g073880.3.1 RHF2A, Solyc06g073880 E3 ubiquitin-protein ligase RHF2A OS=Arabidopsis... 0.07 OrthoFinder output from all 47 species
Solyc10g081710.2.1 RHF2A, Solyc10g081710 E3 ubiquitin-protein ligase RHF2A OS=Arabidopsis... 0.04 OrthoFinder output from all 47 species
Spa_g08484 RHF2A regulatory E3 ubiquitin ligase *(RHF) & original... 0.04 OrthoFinder output from all 47 species
Tin_g10133 RHF2A regulatory E3 ubiquiTin ligase *(RHF) & original... 0.03 OrthoFinder output from all 47 species
Tin_g20546 RHF2A regulatory E3 ubiquiTin ligase *(RHF) & original... 0.02 OrthoFinder output from all 47 species
Zm00001e011896_P004 RHF2A, Zm00001e011896 E3 ubiquitin-protein ligase RHF2A OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
Zm00001e024418_P001 RHF2A, Zm00001e024418 E3 ubiquitin-protein ligase RHF2A OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP HCCA
MF GO:0004672 protein kinase activity IEP HCCA
MF GO:0004674 protein serine/threonine kinase activity IEP HCCA
MF GO:0005524 ATP binding IEP HCCA
BP GO:0006468 protein phosphorylation IEP HCCA
BP GO:0006644 phospholipid metabolic process IEP HCCA
BP GO:0006650 glycerophospholipid metabolic process IEP HCCA
BP GO:0006793 phosphorus metabolic process IEP HCCA
BP GO:0006796 phosphate-containing compound metabolic process IEP HCCA
BP GO:0006807 nitrogen compound metabolic process IEP HCCA
BP GO:0006886 intracellular protein transport IEP HCCA
BP GO:0008104 protein localization IEP HCCA
BP GO:0008150 biological_process IEP HCCA
BP GO:0008152 metabolic process IEP HCCA
BP GO:0009987 cellular process IEP HCCA
BP GO:0015031 protein transport IEP HCCA
MF GO:0016301 kinase activity IEP HCCA
MF GO:0016307 phosphatidylinositol phosphate kinase activity IEP HCCA
BP GO:0016310 phosphorylation IEP HCCA
MF GO:0016740 transferase activity IEP HCCA
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP HCCA
MF GO:0016773 phosphotransferase activity, alcohol group as acceptor IEP HCCA
MF GO:0017076 purine nucleotide binding IEP HCCA
BP GO:0019538 protein metabolic process IEP HCCA
MF GO:0030554 adenyl nucleotide binding IEP HCCA
MF GO:0032553 ribonucleotide binding IEP HCCA
MF GO:0032555 purine ribonucleotide binding IEP HCCA
MF GO:0032559 adenyl ribonucleotide binding IEP HCCA
BP GO:0033036 macromolecule localization IEP HCCA
MF GO:0035639 purine ribonucleoside triphosphate binding IEP HCCA
MF GO:0036094 small molecule binding IEP HCCA
BP GO:0036211 protein modification process IEP HCCA
MF GO:0043167 ion binding IEP HCCA
MF GO:0043168 anion binding IEP HCCA
BP GO:0043170 macromolecule metabolic process IEP HCCA
BP GO:0043412 macromolecule modification IEP HCCA
BP GO:0044237 cellular metabolic process IEP HCCA
BP GO:0044238 primary metabolic process IEP HCCA
BP GO:0045184 establishment of protein localization IEP HCCA
BP GO:0046486 glycerolipid metabolic process IEP HCCA
BP GO:0046488 phosphatidylinositol metabolic process IEP HCCA
BP GO:0046907 intracellular transport IEP HCCA
BP GO:0051641 cellular localization IEP HCCA
BP GO:0051649 establishment of localization in cell IEP HCCA
BP GO:0070727 cellular macromolecule localization IEP HCCA
BP GO:0071702 organic substance transport IEP HCCA
BP GO:0071704 organic substance metabolic process IEP HCCA
BP GO:0071705 nitrogen compound transport IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:0097367 carbohydrate derivative binding IEP HCCA
MF GO:0140096 catalytic activity, acting on a protein IEP HCCA
MF GO:1901265 nucleoside phosphate binding IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
BP GO:1901564 organonitrogen compound metabolic process IEP HCCA
InterPro domains Description Start Stop
IPR001841 Znf_RING 32 73
No external refs found!