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  5. LOC_Os11g34200.1

LOC_Os11g34200.1 (NF-YC11, LOC_Os11g34200)


Aliases : NF-YC11, LOC_Os11g34200

Description : component alpha of TATA box-binding protein NC2 regulator complex


Gene families : OG0002663 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002663_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os11g34200.1

Target Alias Description ECC score Gene Family Method Actions
Als_g00603 No alias component alpha of TATA box-binding protein NC2... 0.03 OrthoFinder output from all 47 species
Aob_g05774 NF-YC11 component alpha of TATA box-binding protein NC2... 0.02 OrthoFinder output from all 47 species
Aop_g01173 No alias component alpha of TATA box-binding protein NC2... 0.03 OrthoFinder output from all 47 species
GSVIVT01036581001 NF-YC11 RNA biosynthesis.RNA polymerase II-dependent... 0.04 OrthoFinder output from all 47 species
Lfl_g05933 No alias component alpha of TATA box-binding protein NC2... 0.02 OrthoFinder output from all 47 species
MA_14798g0010 No alias component alpha of TATA box-binding protein NC2 regulator complex 0.03 OrthoFinder output from all 47 species
Msp_g01450 No alias component alpha of TATA box-binding protein NC2... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0008134 transcription factor binding IEP HCCA
MF GO:0017025 TBP-class protein binding IEP HCCA
MF GO:0140296 general transcription initiation factor binding IEP HCCA
InterPro domains Description Start Stop
IPR003958 CBFA_NFYB_domain 8 71
No external refs found!