LOC_Os02g42320.3


Description : component alpha type-2 of 26S proteasome


Gene families : OG_01_0002864 (Archaeplastida) Phylogenetic Tree(s): OG_01_0002864_tree ,
OG_02_0002731 (LandPlants) Phylogenetic Tree(s): OG_02_0002731_tree ,
OG_03_0002532 (SeedPlants) Phylogenetic Tree(s): OG_03_0002532_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os02g42320.3
Cluster HCCA: Cluster_342

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00029p00056790 evm_27.TU.AmTr_v1... Proteasome subunit alpha type-2-B OS=Arabidopsis thaliana 0.05 Archaeplastida
AT1G16470 PAB1 proteasome subunit PAB1 0.04 Archaeplastida
AT1G79210 No alias N-terminal nucleophile aminohydrolases (Ntn hydrolases)... 0.04 Archaeplastida
Cpa|evm.model.tig00021357.40 No alias Proteasome subunit alpha type-2-A OS=Arabidopsis thaliana 0.06 Archaeplastida
Cre08.g373250 No alias Protein degradation.26S proteasome.20S core... 0.08 Archaeplastida
Mp3g16380.1 No alias component alpha type-2 of 26S proteasome 0.04 Archaeplastida
Pp3c11_10390V3.1 No alias proteasome subunit PAB1 0.06 Archaeplastida
Pp3c7_18410V3.1 No alias proteasome subunit PAB1 0.02 Archaeplastida
Smo177615 No alias Protein degradation.26S proteasome.20S core... 0.03 Archaeplastida
Solyc07g055080.3.1 No alias component alpha type-2 of 26S proteasome 0.03 Archaeplastida
Solyc10g008010.4.1 No alias component alpha type-2 of 26S proteasome 0.03 Archaeplastida
Zm00001e023061_P001 No alias component alpha type-2 of 26S proteasome 0.02 Archaeplastida
Zm00001e023064_P001 No alias component alpha type-2 of 26S proteasome 0.05 Archaeplastida
AMTR_s00029p00056790 evm_27.TU.AmTr_v1... Proteasome subunit alpha type-2-B OS=Arabidopsis thaliana 0.05 LandPlants
AT1G16470 PAB1 proteasome subunit PAB1 0.04 LandPlants
AT1G79210 No alias N-terminal nucleophile aminohydrolases (Ntn hydrolases)... 0.04 LandPlants
GSVIVT01012066001 No alias Protein degradation.26S proteasome.20S core... 0.02 LandPlants
Gb_09565 No alias component alpha type-2 of 26S proteasome 0.02 LandPlants
Mp3g16380.1 No alias component alpha type-2 of 26S proteasome 0.04 LandPlants
Pp3c11_10390V3.1 No alias proteasome subunit PAB1 0.06 LandPlants
Pp3c7_18410V3.1 No alias proteasome subunit PAB1 0.02 LandPlants
Smo177615 No alias Protein degradation.26S proteasome.20S core... 0.03 LandPlants
Solyc07g055080.3.1 No alias component alpha type-2 of 26S proteasome 0.03 LandPlants
Solyc10g008010.4.1 No alias component alpha type-2 of 26S proteasome 0.03 LandPlants
Zm00001e023061_P001 No alias component alpha type-2 of 26S proteasome 0.02 LandPlants
Zm00001e023064_P001 No alias component alpha type-2 of 26S proteasome 0.05 LandPlants
AMTR_s00029p00056790 evm_27.TU.AmTr_v1... Proteasome subunit alpha type-2-B OS=Arabidopsis thaliana 0.05 SeedPlants
AT1G16470 PAB1 proteasome subunit PAB1 0.04 SeedPlants
AT1G79210 No alias N-terminal nucleophile aminohydrolases (Ntn hydrolases)... 0.04 SeedPlants
GSVIVT01012066001 No alias Protein degradation.26S proteasome.20S core... 0.02 SeedPlants
Gb_09565 No alias component alpha type-2 of 26S proteasome 0.02 SeedPlants
MA_9995924g0010 No alias Proteasome subunit alpha type-2-B OS=Arabidopsis... 0.01 SeedPlants
Solyc07g055080.3.1 No alias component alpha type-2 of 26S proteasome 0.03 SeedPlants
Solyc10g008010.4.1 No alias component alpha type-2 of 26S proteasome 0.03 SeedPlants
Zm00001e015205_P001 No alias component alpha type-2 of 26S proteasome 0.01 SeedPlants
Zm00001e023064_P001 No alias component alpha type-2 of 26S proteasome 0.05 SeedPlants

Type GO Term Name Evidence Source
MF GO:0004298 threonine-type endopeptidase activity IEA Interproscan
CC GO:0005839 proteasome core complex IEA Interproscan
BP GO:0051603 proteolysis involved in cellular protein catabolic process IEA Interproscan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR001353 Proteasome_sua/b 64 246
No external refs found!