LOC_Os11g29710.1 (LOC_Os11g29710)


Aliases : LOC_Os11g29710

Description : F-box protein At1g67340 OS=Arabidopsis thaliana (sp|q9fyf9|fb76_arath : 130.0)


Gene families : OG0000510 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000510_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os11g29710.1

Target Alias Description ECC score Gene Family Method Actions
Adi_g010400 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g011761 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g011762 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g06601 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g36454 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g38619 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g07878 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g15991 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g27540 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene13533.t1 Aspi01Gene13533 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene15724.t1 Aspi01Gene15724 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g16241 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.17G014500.1 Ceric.17G014500 not classified & original description: pacid=50617361... 0.03 OrthoFinder output from all 47 species
Ceric.38G050900.1 Ceric.38G050900 not classified & original description: pacid=50580012... 0.03 OrthoFinder output from all 47 species
Dac_g13030 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dac_g22991 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g05257 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Gb_12108 No alias F-box protein At1g67340 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
LOC_Os04g31610.1 LOC_Os04g31610 F-box protein At1g67340 OS=Arabidopsis thaliana... 0.04 OrthoFinder output from all 47 species
Lfl_g01626 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Lfl_g08620 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Lfl_g19147 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
MA_219531g0010 No alias F-box protein At1g67340 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
Mp2g21990.1 No alias F-box protein At1g67340 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
Nbi_g03690 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g02374 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g21515 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g26207 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g25528 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0028.g009927 No alias not classified & original description: CDS=200-1417 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0047.g013455 No alias not classified & original description: CDS=833-2278 0.02 OrthoFinder output from all 47 species
Smo171141 No alias F-box protein At1g67340 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
Spa_g31042 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e008387_P001 Zm00001e008387 F-box protein At1g67340 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
Type GO Term Name Evidence Source
MF GO:0005215 transporter activity IEP HCCA
BP GO:0006810 transport IEP HCCA
MF GO:0008194 UDP-glycosyltransferase activity IEP HCCA
MF GO:0016491 oxidoreductase activity IEP HCCA
MF GO:0016627 oxidoreductase activity, acting on the CH-CH group of donors IEP HCCA
MF GO:0016636 oxidoreductase activity, acting on the CH-CH group of donors, iron-sulfur protein as acceptor IEP HCCA
MF GO:0022857 transmembrane transporter activity IEP HCCA
BP GO:0051179 localization IEP HCCA
BP GO:0051234 establishment of localization IEP HCCA
MF GO:0051743 red chlorophyll catabolite reductase activity IEP HCCA
BP GO:0055085 transmembrane transport IEP HCCA
InterPro domains Description Start Stop
IPR002893 Znf_MYND 299 340
IPR001810 F-box_dom 54 97
No external refs found!