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  5. LOC_Os11g28360.1

LOC_Os11g28360.1 (ATUBP5, UBP5, PDE323,...)


Aliases : ATUBP5, UBP5, PDE323, LOC_Os11g28360

Description : Ubiquitin carboxyl-terminal hydrolase 5 OS=Arabidopsis thaliana (sp|o22207|ubp5_arath : 365.0)


Gene families : OG0001745 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001745_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os11g28360.1
Cluster HCCA: Cluster_61

Target Alias Description ECC score Gene Family Method Actions
AT4G10590 UBP10 ubiquitin-specific protease 10 0.04 OrthoFinder output from all 47 species
Aev_g07324 ATUBP5, UBP5, PDE323 deubiquitinase *(UBP5/8-11) & original description: none 0.05 OrthoFinder output from all 47 species
Aspi01Gene57987.t1 ATUBP5, UBP5,... deubiquitinase *(UBP5/8-11) & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g02984 ATUBP5, UBP5, PDE323 deubiquitinase *(UBP5/8-11) & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01001899001 ATUBP5, UBP5, PDE323 Protein degradation.peptidase families.cysteine-type... 0.05 OrthoFinder output from all 47 species
GSVIVT01037531001 UBP8 Protein degradation.peptidase families.cysteine-type... 0.04 OrthoFinder output from all 47 species
Gb_11501 ATUBP5, UBP5, PDE323 deubiquitinase (UBP5|8-11) 0.03 OrthoFinder output from all 47 species
Lfl_g02368 ATUBP5, UBP5, PDE323 deubiquitinase *(UBP5/8-11) & original description: none 0.05 OrthoFinder output from all 47 species
MA_10425850g0010 ATUBP5, UBP5, PDE323 Ubiquitin carboxyl-terminal hydrolase 5 OS=Arabidopsis... 0.02 OrthoFinder output from all 47 species
MA_11753g0010 UBP9 deubiquitinase (UBP5|8-11) 0.06 OrthoFinder output from all 47 species
MA_354557g0010 ATUBP5, UBP5, PDE323 deubiquitinase (UBP5|8-11) 0.04 OrthoFinder output from all 47 species
Msp_g00705 ATUBP5, UBP5, PDE323 deubiquitinase *(UBP5/8-11) & original description: none 0.06 OrthoFinder output from all 47 species
Sam_g19443 No alias deubiquitinase *(UBP5/8-11) & original description: none 0.06 OrthoFinder output from all 47 species
Smo61965 UBP9 Protein degradation.peptidase families.cysteine-type... 0.02 OrthoFinder output from all 47 species
Solyc08g083300.4.1 UBP9, Solyc08g083300 deubiquitinase (UBP5|8-11) 0.08 OrthoFinder output from all 47 species
Solyc09g019970.3.1 ATUBP5, UBP5,... deubiquitinase (UBP5|8-11) 0.06 OrthoFinder output from all 47 species
Zm00001e002683_P002 UBP9, Zm00001e002683 deubiquitinase (UBP5|8-11) 0.05 OrthoFinder output from all 47 species
Zm00001e008908_P001 ATUBP5, UBP5,... deubiquitinase (UBP5|8-11) 0.06 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0004843 cysteine-type deubiquitinase activity IEA Interproscan
BP GO:0016579 protein deubiquitination IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0006644 phospholipid metabolic process IEP HCCA
BP GO:0006650 glycerophospholipid metabolic process IEP HCCA
MF GO:0016307 phosphatidylinositol phosphate kinase activity IEP HCCA
BP GO:0044255 cellular lipid metabolic process IEP HCCA
BP GO:0046486 glycerolipid metabolic process IEP HCCA
BP GO:0046488 phosphatidylinositol metabolic process IEP HCCA
InterPro domains Description Start Stop
IPR006615 Pept_C19_DUSP 39 142
IPR001394 Peptidase_C19_UCH 323 369
No external refs found!