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  5. LOC_Os11g16770.1

LOC_Os11g16770.1 (HSP93-V, DCA1,...)


Aliases : HSP93-V, DCA1, ATHSP93-V, CLPC, CLPC1, LOC_Os11g16770

Description : chaperone component ClpC of chloroplast Clp-type protease complex


Gene families : OG0000193 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000193_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os11g16770.1

Target Alias Description ECC score Gene Family Method Actions
LOC_Os04g32560.1 HSP93-V, DCA1,... chaperone component ClpC of chloroplast Clp-type protease complex 0.04 OrthoFinder output from all 47 species
Sacu_v1.1_s0024.g009060 CLPB3, CLPB-P, APG6 organellar chaperone *(Clp-p/Clp-m) & original... 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005524 ATP binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0030246 carbohydrate binding IEP HCCA
MF GO:0030247 polysaccharide binding IEP HCCA
InterPro domains Description Start Stop
IPR003959 ATPase_AAA_core 308 428
IPR003959 ATPase_AAA_core 644 814
IPR041546 ClpA/ClpB_AAA_lid 446 550
IPR019489 Clp_ATPase_C 820 900
No external refs found!