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  5. LOC_Os11g16590.1

LOC_Os11g16590.1 (HSP93-V, DCA1,...)


Aliases : HSP93-V, DCA1, ATHSP93-V, CLPC, CLPC1, LOC_Os11g16590

Description : chaperone component ClpC of chloroplast Clp-type protease complex


Gene families : OG0000193 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000193_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os11g16590.1
Cluster HCCA: Cluster_511

Target Alias Description ECC score Gene Family Method Actions
LOC_Os11g16670.1 LOC_Os11g16670 no hits & (original description: none) 0.06 OrthoFinder output from all 47 species
Ore_g29985 HSP93-V, DCA1,... chaperone component *(ClpC) of chloroplast Clp-type... 0.02 OrthoFinder output from all 47 species
Tin_g01255 SAG15, CLPD, ERD1 chaperone component *(ClpD) of chloroplast Clp-type... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005524 ATP binding IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0006810 transport IEP HCCA
BP GO:0006811 monoatomic ion transport IEP HCCA
BP GO:0006812 monoatomic cation transport IEP HCCA
MF GO:0015299 obsolete solute:proton antiporter activity IEP HCCA
BP GO:0051179 localization IEP HCCA
BP GO:0051234 establishment of localization IEP HCCA
BP GO:0055085 transmembrane transport IEP HCCA
InterPro domains Description Start Stop
IPR019489 Clp_ATPase_C 824 904
IPR041546 ClpA/ClpB_AAA_lid 444 544
IPR004176 Clp_R_dom 188 238
IPR004176 Clp_R_dom 113 164
IPR003959 ATPase_AAA_core 644 817
IPR003959 ATPase_AAA_core 306 422
No external refs found!