1. Home
  2. Species
  3. Oryza sativa
  4. Sequence
  5. LOC_Os11g16330.1

LOC_Os11g16330.1 (SKIP16, LOC_Os11g16330)


Aliases : SKIP16, LOC_Os11g16330

Description : F-box protein SKIP16 OS=Arabidopsis thaliana (sp|q9lnd7|ski16_arath : 264.0)


Gene families : OG0004550 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0004550_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os11g16330.1
Cluster HCCA: Cluster_160

Target Alias Description ECC score Gene Family Method Actions
Dcu_g15859 SKIP16 substrate adaptor *(SKIP16) of SCF E3 ubiquitin ligase... 0.03 OrthoFinder output from all 47 species
Lfl_g09658 SKIP16 substrate adaptor *(SKIP16) of SCF E3 ubiquitin ligase... 0.03 OrthoFinder output from all 47 species
Zm00001e021353_P004 SKIP16, Zm00001e021353 F-box protein SKIP16 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
BP GO:0006914 autophagy IEP HCCA
MF GO:0008168 methyltransferase activity IEP HCCA
BP GO:0009056 catabolic process IEP HCCA
MF GO:0016741 transferase activity, transferring one-carbon groups IEP HCCA
BP GO:0044248 cellular catabolic process IEP HCCA
BP GO:0061919 process utilizing autophagic mechanism IEP HCCA
InterPro domains Description Start Stop
IPR007474 ApaG_domain 324 414
No external refs found!