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  5. LOC_Os11g15460.1

LOC_Os11g15460.1 (LOC_Os11g15460)


Aliases : LOC_Os11g15460

Description : no hits & (original description: none)


Gene families : OG0001496 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001496_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os11g15460.1
Cluster HCCA: Cluster_82

Target Alias Description ECC score Gene Family Method Actions
AT4G03450 No alias Ankyrin repeat family protein 0.03 OrthoFinder output from all 47 species
AT4G03460 No alias Ankyrin repeat family protein 0.04 OrthoFinder output from all 47 species
AT4G03490 No alias Ankyrin repeat family protein 0.04 OrthoFinder output from all 47 species
AT4G03495 No alias No description available 0.04 OrthoFinder output from all 47 species
AT4G14400 ACD6 ankyrin repeat family protein 0.03 OrthoFinder output from all 47 species
GSVIVT01020517001 No alias Protein ACCELERATED CELL DEATH 6 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
Gb_00335 No alias no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Gb_08870 No alias Ankyrin repeat-containing protein NPR4 OS=Oryza sativa... 0.02 OrthoFinder output from all 47 species
Gb_09218 No alias Ankyrin repeat-containing protein ITN1 OS=Arabidopsis... 0.04 OrthoFinder output from all 47 species
Gb_26468 No alias Ankyrin repeat-containing protein At5g02620... 0.02 OrthoFinder output from all 47 species
Gb_26479 No alias Ankyrin repeat-containing protein ITN1 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
Gb_26481 No alias Ankyrin repeat-containing protein ITN1 OS=Arabidopsis... 0.02 OrthoFinder output from all 47 species
Gb_26482 No alias Ankyrin repeat-containing protein ITN1 OS=Arabidopsis... 0.04 OrthoFinder output from all 47 species
Gb_26483 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Gb_26484 No alias Ankyrin repeat-containing protein NPR4 OS=Oryza sativa... 0.03 OrthoFinder output from all 47 species
LOC_Os07g29940.1 LOC_Os07g29940 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
LOC_Os07g34780.1 XBAT33, LOC_Os07g34780 Protein ACCELERATED CELL DEATH 6 OS=Arabidopsis thaliana... 0.05 OrthoFinder output from all 47 species
LOC_Os09g15950.1 LOC_Os09g15950 Ankyrin repeat-containing protein At5g02620... 0.08 OrthoFinder output from all 47 species
LOC_Os09g16760.1 LOC_Os09g16760 Ankyrin repeat-containing protein At2g01680... 0.02 OrthoFinder output from all 47 species
LOC_Os09g17120.1 LOC_Os09g17120 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
LOC_Os11g14630.1 LOC_Os11g14630 Ankyrin repeat-containing protein At2g01680... 0.06 OrthoFinder output from all 47 species
Solyc05g055960.1.1 Solyc05g055960 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Solyc05g055970.4.1 Solyc05g055970 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Solyc07g061750.4.1 Solyc07g061750 Ankyrin repeat-containing protein NPR4 OS=Oryza sativa... 0.03 OrthoFinder output from all 47 species
Solyc07g061760.3.1 Solyc07g061760 Ankyrin repeat-containing protein At5g02620... 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0005215 transporter activity IEP HCCA
BP GO:0006417 regulation of translation IEP HCCA
BP GO:0006810 transport IEP HCCA
BP GO:0009890 negative regulation of biosynthetic process IEP HCCA
BP GO:0009892 negative regulation of metabolic process IEP HCCA
BP GO:0010558 negative regulation of macromolecule biosynthetic process IEP HCCA
BP GO:0010605 negative regulation of macromolecule metabolic process IEP HCCA
BP GO:0010608 post-transcriptional regulation of gene expression IEP HCCA
BP GO:0010629 negative regulation of gene expression IEP HCCA
MF GO:0016799 hydrolase activity, hydrolyzing N-glycosyl compounds IEP HCCA
BP GO:0017148 negative regulation of translation IEP HCCA
MF GO:0022857 transmembrane transporter activity IEP HCCA
MF GO:0030597 RNA glycosylase activity IEP HCCA
MF GO:0030598 rRNA N-glycosylase activity IEP HCCA
BP GO:0031324 negative regulation of cellular metabolic process IEP HCCA
BP GO:0031327 negative regulation of cellular biosynthetic process IEP HCCA
BP GO:0034248 regulation of amide metabolic process IEP HCCA
BP GO:0034249 negative regulation of amide metabolic process IEP HCCA
BP GO:0048519 negative regulation of biological process IEP HCCA
BP GO:0048523 negative regulation of cellular process IEP HCCA
BP GO:0051172 negative regulation of nitrogen compound metabolic process IEP HCCA
BP GO:0051179 localization IEP HCCA
BP GO:0051234 establishment of localization IEP HCCA
BP GO:0051246 regulation of protein metabolic process IEP HCCA
BP GO:0051248 negative regulation of protein metabolic process IEP HCCA
BP GO:0055085 transmembrane transport IEP HCCA
MF GO:0140102 catalytic activity, acting on a rRNA IEP HCCA
BP GO:2000112 regulation of cellular macromolecule biosynthetic process IEP HCCA
BP GO:2000113 negative regulation of cellular macromolecule biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR020683 DUF3447 233 325
No external refs found!