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  5. LOC_Os11g15210.1

LOC_Os11g15210.1 (EGL1, EGL3, ATMYC-2,...)


Aliases : EGL1, EGL3, ATMYC-2, LOC_Os11g15210

Description : transcription factor (bHLH)


Gene families : OG0000245 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000245_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os11g15210.1
Cluster HCCA: Cluster_47

Target Alias Description ECC score Gene Family Method Actions
Aspi01Gene53938.t1 Aspi01Gene53938 bHLH-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g71000 ATMYC2, MYC2,... bHLH-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Dcu_g08882 ATMYC2, MYC2,... bHLH-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0227.g026359 ATMYC2, MYC2,... bHLH-type transcription factor & original description: CDS=1-2571 0.03 OrthoFinder output from all 47 species
Solyc08g008600.3.1 Solyc08g008600 transcription factor (bHLH) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0046983 protein dimerization activity IEA Interproscan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR011598 bHLH_dom 244 290
IPR025610 MYC/MYB_N 13 51
No external refs found!