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  5. LOC_Os11g13850.2

LOC_Os11g13850.2 (LOC_Os11g13850)


Aliases : LOC_Os11g13850

Description : Psb33 protein involved in PS-II assembly


Gene families : OG0003633 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0003633_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os11g13850.2

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00099p00029990 evm_27.TU.AmTr_v1... Photosynthesis.photophosphorylation.photosystem... 0.05 OrthoFinder output from all 47 species
AT1G71500 No alias Rieske (2Fe-2S) domain-containing protein 0.15 OrthoFinder output from all 47 species
Adi_g025805 No alias protein involved in PS-II assembly *(Psb33) & original... 0.04 OrthoFinder output from all 47 species
Aev_g09772 No alias protein involved in PS-II assembly *(Psb33) & original... 0.04 OrthoFinder output from all 47 species
Ala_g01051 No alias protein involved in PS-II assembly *(Psb33) & original... 0.04 OrthoFinder output from all 47 species
Als_g08451 No alias protein involved in PS-II assembly *(Psb33) & original... 0.04 OrthoFinder output from all 47 species
Als_g11770 No alias protein involved in PS-II assembly *(Psb33) & original... 0.07 OrthoFinder output from all 47 species
Aob_g00988 No alias protein involved in PS-II assembly *(Psb33) & original... 0.04 OrthoFinder output from all 47 species
Aop_g06553 No alias protein involved in PS-II assembly *(Psb33) & original... 0.09 OrthoFinder output from all 47 species
Aspi01Gene15023.t1 Aspi01Gene15023 protein involved in PS-II assembly *(Psb33) & original... 0.05 OrthoFinder output from all 47 species
Azfi_s0212.g058145 No alias protein involved in PS-II assembly *(Psb33) & original... 0.06 OrthoFinder output from all 47 species
Cba_g14675 No alias protein involved in PS-II assembly *(Psb33) & original... 0.02 OrthoFinder output from all 47 species
Ceric.16G079700.1 Ceric.16G079700 protein involved in PS-II assembly *(Psb33) & original... 0.11 OrthoFinder output from all 47 species
Cre09.g411200 No alias Photosynthesis.photophosphorylation.photosystem... 0.04 OrthoFinder output from all 47 species
Dac_g07653 No alias protein involved in PS-II assembly *(Psb33) & original... 0.05 OrthoFinder output from all 47 species
Dac_g13733 No alias protein involved in PS-II assembly *(Psb33) & original... 0.02 OrthoFinder output from all 47 species
Dcu_g20317 No alias protein involved in PS-II assembly *(Psb33) & original... 0.03 OrthoFinder output from all 47 species
Dde_g09027 No alias protein involved in PS-II assembly *(Psb33) & original... 0.04 OrthoFinder output from all 47 species
Ehy_g15961 No alias protein involved in PS-II assembly *(Psb33) & original... 0.06 OrthoFinder output from all 47 species
GSVIVT01036428001 No alias Photosynthesis.photophosphorylation.photosystem... 0.05 OrthoFinder output from all 47 species
Gb_17341 No alias Psb33 protein involved in PS-II assembly 0.08 OrthoFinder output from all 47 species
Len_g00495 No alias protein involved in PS-II assembly *(Psb33) & original... 0.03 OrthoFinder output from all 47 species
Len_g01078 No alias protein involved in PS-II assembly *(Psb33) & original... 0.04 OrthoFinder output from all 47 species
Lfl_g02682 No alias protein involved in PS-II assembly *(Psb33) & original... 0.04 OrthoFinder output from all 47 species
Lfl_g19856 No alias protein involved in PS-II assembly *(Psb33) & original... 0.04 OrthoFinder output from all 47 species
Mp1g07060.1 No alias Psb33 protein involved in PS-II assembly 0.08 OrthoFinder output from all 47 species
Msp_g04633 No alias protein involved in PS-II assembly *(Psb33) & original... 0.04 OrthoFinder output from all 47 species
Nbi_g07139 No alias protein involved in PS-II assembly *(Psb33) & original... 0.06 OrthoFinder output from all 47 species
Ore_g30344 No alias protein involved in PS-II assembly *(Psb33) & original... 0.03 OrthoFinder output from all 47 species
Pir_g11115 No alias protein involved in PS-II assembly *(Psb33) & original... 0.09 OrthoFinder output from all 47 species
Pnu_g01988 No alias protein involved in PS-II assembly *(Psb33) & original... 0.07 OrthoFinder output from all 47 species
Ppi_g01970 No alias protein involved in PS-II assembly *(Psb33) & original... 0.02 OrthoFinder output from all 47 species
Ppi_g30084 No alias protein involved in PS-II assembly *(Psb33) & original... 0.02 OrthoFinder output from all 47 species
Sam_g08540 No alias protein involved in PS-II assembly *(Psb33) & original... 0.07 OrthoFinder output from all 47 species
Sam_g49855 No alias protein involved in PS-II assembly *(Psb33) & original... 0.03 OrthoFinder output from all 47 species
Solyc11g042640.2.1 Solyc11g042640 Psb33 protein involved in PS-II assembly 0.06 OrthoFinder output from all 47 species
Spa_g09786 No alias protein involved in PS-II assembly *(Psb33) & original... 0.05 OrthoFinder output from all 47 species
Tin_g01591 No alias protein involved in PS-II assembly *(Psb33) & original... 0.05 OrthoFinder output from all 47 species
Zm00001e018788_P001 Zm00001e018788 Psb33 protein involved in PS-II assembly 0.06 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0008942 nitrite reductase [NAD(P)H] activity IEA Interproscan
BP GO:0055114 obsolete oxidation-reduction process IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003924 GTPase activity IEP HCCA
MF GO:0004356 glutamate-ammonia ligase activity IEP HCCA
MF GO:0004618 phosphoglycerate kinase activity IEP HCCA
MF GO:0004807 triose-phosphate isomerase activity IEP HCCA
MF GO:0005525 GTP binding IEP HCCA
BP GO:0006082 organic acid metabolic process IEP HCCA
BP GO:0006090 pyruvate metabolic process IEP HCCA
BP GO:0006091 generation of precursor metabolites and energy IEP HCCA
BP GO:0006096 glycolytic process IEP HCCA
BP GO:0006139 nucleobase-containing compound metabolic process IEP HCCA
BP GO:0006163 purine nucleotide metabolic process IEP HCCA
BP GO:0006165 nucleoside diphosphate phosphorylation IEP HCCA
BP GO:0006541 glutamine metabolic process IEP HCCA
BP GO:0006542 glutamine biosynthetic process IEP HCCA
BP GO:0006753 nucleoside phosphate metabolic process IEP HCCA
BP GO:0006757 ATP generation from ADP IEP HCCA
BP GO:0008652 amino acid biosynthetic process IEP HCCA
BP GO:0009064 glutamine family amino acid metabolic process IEP HCCA
BP GO:0009084 glutamine family amino acid biosynthetic process IEP HCCA
BP GO:0009117 nucleotide metabolic process IEP HCCA
BP GO:0009132 nucleoside diphosphate metabolic process IEP HCCA
BP GO:0009135 purine nucleoside diphosphate metabolic process IEP HCCA
BP GO:0009141 nucleoside triphosphate metabolic process IEP HCCA
BP GO:0009144 purine nucleoside triphosphate metabolic process IEP HCCA
BP GO:0009150 purine ribonucleotide metabolic process IEP HCCA
BP GO:0009179 purine ribonucleoside diphosphate metabolic process IEP HCCA
BP GO:0009185 ribonucleoside diphosphate metabolic process IEP HCCA
BP GO:0009199 ribonucleoside triphosphate metabolic process IEP HCCA
BP GO:0009205 purine ribonucleoside triphosphate metabolic process IEP HCCA
BP GO:0009259 ribonucleotide metabolic process IEP HCCA
CC GO:0009507 chloroplast IEP HCCA
CC GO:0009536 plastid IEP HCCA
BP GO:0015969 guanosine tetraphosphate metabolic process IEP HCCA
BP GO:0016052 carbohydrate catabolic process IEP HCCA
BP GO:0016053 organic acid biosynthetic process IEP HCCA
MF GO:0016211 ammonia ligase activity IEP HCCA
MF GO:0016462 pyrophosphatase activity IEP HCCA
MF GO:0016774 phosphotransferase activity, carboxyl group as acceptor IEP HCCA
MF GO:0016817 hydrolase activity, acting on acid anhydrides IEP HCCA
MF GO:0016818 hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides IEP HCCA
MF GO:0016851 magnesium chelatase activity IEP HCCA
MF GO:0016860 intramolecular oxidoreductase activity IEP HCCA
MF GO:0016861 intramolecular oxidoreductase activity, interconverting aldoses and ketoses IEP HCCA
MF GO:0016874 ligase activity IEP HCCA
MF GO:0016879 ligase activity, forming carbon-nitrogen bonds IEP HCCA
MF GO:0016880 acid-ammonia (or amide) ligase activity IEP HCCA
MF GO:0017111 ribonucleoside triphosphate phosphatase activity IEP HCCA
MF GO:0019001 guanyl nucleotide binding IEP HCCA
BP GO:0019637 organophosphate metabolic process IEP HCCA
BP GO:0019693 ribose phosphate metabolic process IEP HCCA
BP GO:0019752 carboxylic acid metabolic process IEP HCCA
MF GO:0032561 guanyl ribonucleotide binding IEP HCCA
BP GO:0032787 monocarboxylic acid metabolic process IEP HCCA
BP GO:0033865 nucleoside bisphosphate metabolic process IEP HCCA
BP GO:0033875 ribonucleoside bisphosphate metabolic process IEP HCCA
BP GO:0034032 purine nucleoside bisphosphate metabolic process IEP HCCA
BP GO:0034035 purine ribonucleoside bisphosphate metabolic process IEP HCCA
BP GO:0043436 oxoacid metabolic process IEP HCCA
BP GO:0044281 small molecule metabolic process IEP HCCA
BP GO:0046031 ADP metabolic process IEP HCCA
BP GO:0046034 ATP metabolic process IEP HCCA
BP GO:0046394 carboxylic acid biosynthetic process IEP HCCA
BP GO:0046939 nucleotide phosphorylation IEP HCCA
MF GO:0051002 ligase activity, forming nitrogen-metal bonds IEP HCCA
MF GO:0051003 ligase activity, forming nitrogen-metal bonds, forming coordination complexes IEP HCCA
BP GO:0055086 nucleobase-containing small molecule metabolic process IEP HCCA
BP GO:0072521 purine-containing compound metabolic process IEP HCCA
BP GO:1901135 carbohydrate derivative metabolic process IEP HCCA
BP GO:1901605 alpha-amino acid metabolic process IEP HCCA
BP GO:1901607 alpha-amino acid biosynthetic process IEP HCCA
MF GO:2001070 starch binding IEP HCCA
InterPro domains Description Start Stop
IPR012748 Rieske-like_NirD 69 181
No external refs found!