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  5. LOC_Os11g10130.1

LOC_Os11g10130.1 (BW52, ATMYB52, MYB52,...)


Aliases : BW52, ATMYB52, MYB52, LOC_Os11g10130

Description : transcription factor (MYB)


Gene families : OG0000080 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000080_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os11g10130.1
Cluster HCCA: Cluster_46

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00001p00272410 AtMYB98, MYB98,... RNA biosynthesis.transcriptional activation.MYB... 0.03 OrthoFinder output from all 47 species
AMTR_s00006p00225600 MYBR1, MYB44,... RNA biosynthesis.transcriptional activation.MYB... 0.03 OrthoFinder output from all 47 species
AMTR_s00096p00076220 AtMYB98, MYB98,... RNA biosynthesis.transcriptional activation.MYB... 0.02 OrthoFinder output from all 47 species
AT1G17950 BW52, ATMYB52, MYB52 myb domain protein 52 0.03 OrthoFinder output from all 47 species
AT1G26780 AtMYB117, LOF1, MYB117 myb domain protein 117 0.05 OrthoFinder output from all 47 species
AT1G69560 LOF2, MYB105, ATMYB105 myb domain protein 105 0.02 OrthoFinder output from all 47 species
AT1G73410 MYB54, ATMYB54 myb domain protein 54 0.07 OrthoFinder output from all 47 species
AT3G27785 PGA37, ATMYB118, MYB118 myb domain protein 118 0.03 OrthoFinder output from all 47 species
AT3G29020 MYB110, AtMYB110 myb domain protein 110 0.05 OrthoFinder output from all 47 species
AT4G33450 ATMYB69, MYB69 myb domain protein 69 0.04 OrthoFinder output from all 47 species
AT5G11050 MYB64, AtMYB64 myb domain protein 64 0.02 OrthoFinder output from all 47 species
AT5G39700 MYB89, AtMYB89 myb domain protein 89 0.03 OrthoFinder output from all 47 species
AT5G40360 MYB115, AtMYB115 myb domain protein 115 0.02 OrthoFinder output from all 47 species
AT5G58850 ATMYB119, MYB119 myb domain protein 119 0.02 OrthoFinder output from all 47 species
Adi_g007057 MYB73, ATMYB73 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g059961 MYB70, AtMYB70 MYB class-R2R3 subgroup-22/23 transcription factor &... 0.03 OrthoFinder output from all 47 species
Adi_g081416 ATMYB119, MYB119 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g103148 MYB70, AtMYB70 MYB class-R2R3 subgroup-22/23 transcription factor &... 0.02 OrthoFinder output from all 47 species
Adi_g109382 MYB77 MYB class-R2R3 subgroup-22/23 transcription factor &... 0.04 OrthoFinder output from all 47 species
Aev_g39348 MYB3R-1,... not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g09398 LOF2, MYB105, ATMYB105 MYB class-R2R3 subgroup-21 transcription factor &... 0.04 OrthoFinder output from all 47 species
Als_g12553 MYB77 MYB class-R2R3 subgroup-22/23 transcription factor &... 0.02 OrthoFinder output from all 47 species
Als_g47836 MYB3R-1,... R1R2R3-MYB transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene14847.t1 MYB70, AtMYB70,... MYB class-R2R3 subgroup-22/23 transcription factor &... 0.02 OrthoFinder output from all 47 species
Aspi01Gene27436.t1 LOF2, MYB105,... MYB class-R2R3 subgroup-21 transcription factor &... 0.03 OrthoFinder output from all 47 species
Aspi01Gene45903.t1 MYBR1, MYB44,... MYB class-R2R3 subgroup-22/23 transcription factor &... 0.02 OrthoFinder output from all 47 species
Aspi01Gene54282.t1 MYB1, AtMYB1,... not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene63601.t1 LOF2, MYB105,... MYB class-R2R3 subgroup-21 transcription factor &... 0.03 OrthoFinder output from all 47 species
Azfi_s0103.g044681 BW52, ATMYB52, MYB52 MYB class-R2R3 subgroup-21 transcription factor &... 0.03 OrthoFinder output from all 47 species
Azfi_s0629.g080127 MYBR1, MYB44,... MYB class-R2R3 subgroup-22/23 transcription factor &... 0.04 OrthoFinder output from all 47 species
Azfi_s3609.g116385 MYB73, ATMYB73 not classified & original description: CDS=1-897 0.03 OrthoFinder output from all 47 species
Ceric.06G009000.1 ATMYB101,... not classified & original description: pacid=50620364... 0.03 OrthoFinder output from all 47 species
Ceric.30G050500.1 ATMYB119,... MYB class-R2R3 transcription factor & original... 0.03 OrthoFinder output from all 47 species
Dcu_g09101 LOF2, MYB105, ATMYB105 MYB class-R2R3 subgroup-21 transcription factor &... 0.02 OrthoFinder output from all 47 species
Dde_g09308 MYB73, ATMYB73 MYB class-R2R3 subgroup-22/23 transcription factor &... 0.02 OrthoFinder output from all 47 species
Dde_g12855 LOF2, MYB105, ATMYB105 MYB class-R2R3 subgroup-21 transcription factor &... 0.02 OrthoFinder output from all 47 species
Ehy_g05845 BW52, ATMYB52, MYB52 MYB class-R2R3 subgroup-21 transcription factor &... 0.03 OrthoFinder output from all 47 species
Ehy_g09643 MYBR1, MYB44,... MYB class-R2R3 subgroup-22/23 transcription factor &... 0.02 OrthoFinder output from all 47 species
GSVIVT01007731001 AtMYB98, MYB98 RNA biosynthesis.transcriptional activation.MYB... 0.03 OrthoFinder output from all 47 species
GSVIVT01008484001 MYB54, ATMYB54 RNA biosynthesis.transcriptional activation.MYB... 0.03 OrthoFinder output from all 47 species
GSVIVT01019967001 AtMYB117, LOF1, MYB117 RNA biosynthesis.transcriptional activation.MYB... 0.03 OrthoFinder output from all 47 species
GSVIVT01027493001 MYB3R-1,... RNA biosynthesis.transcriptional activation.MYB... 0.03 OrthoFinder output from all 47 species
LOC_Os04g08590.1 LOC_Os04g08590 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
LOC_Os06g43090.1 MYBR1, MYB44,... transcription factor (MYB) 0.06 OrthoFinder output from all 47 species
LOC_Os08g33800.1 LOF2, MYB105,... transcription factor (MYB) 0.04 OrthoFinder output from all 47 species
Len_g10129 MYB56, AtMYB56 MYB class-R2R3 subgroup-21 transcription factor &... 0.04 OrthoFinder output from all 47 species
Lfl_g25897 MYB77 not classified & original description: none 0.02 OrthoFinder output from all 47 species
MA_89683g0010 MYBR1, MYB44,... transcription factor (MYB) 0.02 OrthoFinder output from all 47 species
Mp8g11870.1 AtMYB117, LOF1, MYB117 transcription factor (MYB) 0.03 OrthoFinder output from all 47 species
Msp_g26462 AtMYB98, MYB98 MYB class-R2R3 transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Msp_g32001 LOF2, MYB105, ATMYB105 MYB class-R2R3 subgroup-21 transcription factor &... 0.02 OrthoFinder output from all 47 species
Nbi_g12490 MYB56, AtMYB56 MYB class-R2R3 subgroup-21 transcription factor &... 0.02 OrthoFinder output from all 47 species
Ore_g27825 LOF2, MYB105, ATMYB105 MYB class-R2R3 subgroup-21 transcription factor &... 0.04 OrthoFinder output from all 47 species
Ore_g29088 MYB1, AtMYB1 MYB class-R2R3 subgroup-22/23 transcription factor &... 0.02 OrthoFinder output from all 47 species
Ore_g32846 MYB77 MYB class-R2R3 subgroup-22/23 transcription factor &... 0.02 OrthoFinder output from all 47 species
Ore_g33238 MYB3R-1,... R1R2R3-MYB transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g29190 MYBR1, MYB44,... MYB class-R2R3 subgroup-22/23 transcription factor &... 0.02 OrthoFinder output from all 47 species
Pir_g44188 ATMYB3R5, MYB3R-5 R1R2R3-MYB transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g45930 MYB88, AtMYB88 MYB class-R2R3 transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g08134 MYB3R-1,... R1R2R3-MYB transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Pnu_g11690 LOF2, MYB105, ATMYB105 MYB class-R2R3 subgroup-21 transcription factor &... 0.04 OrthoFinder output from all 47 species
Pnu_g12037 MYBR1, MYB44,... MYB class-R2R3 subgroup-22/23 transcription factor &... 0.03 OrthoFinder output from all 47 species
Pnu_g27096 MYB88, AtMYB88 MYB class-R2R3 transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Pp3c17_19960V3.1 Pp3c17_19960 No annotation 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0096.g019382 MYB73, ATMYB73 MYB class-R2R3 subgroup-22/23 transcription factor &... 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0129.g021926 LOF2, MYB105, ATMYB105 MYB class-R2R3 subgroup-21 transcription factor &... 0.04 OrthoFinder output from all 47 species
Sacu_v1.1_s0226.g026344 MYB70, AtMYB70 MYB class-R2R3 subgroup-22/23 transcription factor &... 0.04 OrthoFinder output from all 47 species
Smo6091 AtMYB117, LOF1, MYB117 RNA biosynthesis.transcriptional activation.MYB... 0.04 OrthoFinder output from all 47 species
Smo80553 BW52, ATMYB52, MYB52 RNA biosynthesis.transcriptional activation.MYB... 0.02 OrthoFinder output from all 47 species
Solyc04g005710.3.1 AtMYB124,... transcription factor (MYB) 0.04 OrthoFinder output from all 47 species
Solyc04g079360.1.1 MYB77, Solyc04g079360 transcription factor (MYB) 0.04 OrthoFinder output from all 47 species
Spa_g16126 MYB56, AtMYB56 MYB class-R2R3 subgroup-21 transcription factor &... 0.02 OrthoFinder output from all 47 species
Spa_g41684 LOF2, MYB105, ATMYB105 MYB class-R2R3 subgroup-21 transcription factor &... 0.02 OrthoFinder output from all 47 species
Spa_g51993 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g23248 LOF2, MYB105, ATMYB105 MYB class-R2R3 subgroup-21 transcription factor &... 0.02 OrthoFinder output from all 47 species
Tin_g24569 MYB73, ATMYB73 MYB class-R2R3 subgroup-22/23 transcription factor &... 0.03 OrthoFinder output from all 47 species
Zm00001e005044_P002 ATMYB119,... transcription factor (MYB) 0.04 OrthoFinder output from all 47 species
Zm00001e017363_P001 AtMYB117, LOF1,... transcription factor (MYB) 0.04 OrthoFinder output from all 47 species
Zm00001e018391_P001 MYB54, ATMYB54,... transcription factor (MYB) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004842 ubiquitin-protein transferase activity IEP HCCA
BP GO:0009719 response to endogenous stimulus IEP HCCA
BP GO:0009725 response to hormone IEP HCCA
BP GO:0010033 response to organic substance IEP HCCA
MF GO:0015399 primary active transmembrane transporter activity IEP HCCA
MF GO:0016462 pyrophosphatase activity IEP HCCA
BP GO:0016567 protein ubiquitination IEP HCCA
MF GO:0016817 hydrolase activity, acting on acid anhydrides IEP HCCA
MF GO:0016818 hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides IEP HCCA
MF GO:0016887 ATP hydrolysis activity IEP HCCA
MF GO:0017111 ribonucleoside triphosphate phosphatase activity IEP HCCA
MF GO:0019787 ubiquitin-like protein transferase activity IEP HCCA
BP GO:0032446 protein modification by small protein conjugation IEP HCCA
BP GO:0042221 response to chemical IEP HCCA
MF GO:0042626 ATPase-coupled transmembrane transporter activity IEP HCCA
BP GO:0055085 transmembrane transport IEP HCCA
InterPro domains Description Start Stop
IPR001005 SANT/Myb 78 121
IPR001005 SANT/Myb 26 71
No external refs found!