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  5. LOC_Os11g08660.1

LOC_Os11g08660.1 (MEI1, LOC_Os11g08660)


Aliases : MEI1, LOC_Os11g08660

Description : no hits & (original description: none)


Gene families : OG0005149 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0005149_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os11g08660.1

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00013p00056220 MEI1,... No description available 0.02 OrthoFinder output from all 47 species
AMTR_s00013p00056780 MEI1,... No description available 0.03 OrthoFinder output from all 47 species
AT1G77320 MEI1 transcription coactivators 0.07 OrthoFinder output from all 47 species
Adi_g015604 MEI1 DNA damage checkpoint activation factor *(MEI1) &... 0.02 OrthoFinder output from all 47 species
Aev_g19332 MEI1 DNA damage checkpoint activation factor *(MEI1) &... 0.02 OrthoFinder output from all 47 species
Ala_g15115 MEI1 DNA damage checkpoint activation factor *(MEI1) &... 0.03 OrthoFinder output from all 47 species
Aob_g41010 MEI1 DNA damage checkpoint activation factor *(MEI1) &... 0.03 OrthoFinder output from all 47 species
Cba_g37364 MEI1 DNA damage checkpoint activation factor *(MEI1) &... 0.04 OrthoFinder output from all 47 species
Ceric.20G013000.1 MEI1, Ceric.20G013000 DNA damage checkpoint activation factor *(MEI1) &... 0.04 OrthoFinder output from all 47 species
Cpa|evm.model.tig00000378.21 No alias No description available 0.02 OrthoFinder output from all 47 species
Dcu_g17306 MEI1 DNA damage checkpoint activation factor *(MEI1) &... 0.02 OrthoFinder output from all 47 species
Ehy_g19730 MEI1 DNA damage checkpoint activation factor *(MEI1) &... 0.02 OrthoFinder output from all 47 species
Gb_04893 MEI1 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
MA_10426137g0010 MEI1 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Sam_g36257 No alias DNA damage checkpoint activation factor *(MEI1) &... 0.02 OrthoFinder output from all 47 species
Solyc01g068260.4.1 MEI1, Solyc01g068260 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Tin_g21835 MEI1 DNA damage checkpoint activation factor *(MEI1) &... 0.03 OrthoFinder output from all 47 species
Zm00001e008973_P003 MEI1, Zm00001e008973 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003677 DNA binding IEP HCCA
MF GO:0003689 DNA clamp loader activity IEP HCCA
MF GO:0003690 double-stranded DNA binding IEP HCCA
MF GO:0003899 DNA-directed 5'-3' RNA polymerase activity IEP HCCA
MF GO:0005488 binding IEP HCCA
CC GO:0005575 cellular_component IEP HCCA
CC GO:0005634 nucleus IEP HCCA
CC GO:0005663 DNA replication factor C complex IEP HCCA
BP GO:0006139 nucleobase-containing compound metabolic process IEP HCCA
BP GO:0006259 DNA metabolic process IEP HCCA
BP GO:0006260 DNA replication IEP HCCA
BP GO:0006298 mismatch repair IEP HCCA
BP GO:0006351 DNA-templated transcription IEP HCCA
BP GO:0006479 protein methylation IEP HCCA
BP GO:0006725 cellular aromatic compound metabolic process IEP HCCA
MF GO:0008094 ATP-dependent activity, acting on DNA IEP HCCA
MF GO:0008170 N-methyltransferase activity IEP HCCA
BP GO:0008213 protein alkylation IEP HCCA
MF GO:0008270 zinc ion binding IEP HCCA
MF GO:0008276 protein methyltransferase activity IEP HCCA
MF GO:0008757 S-adenosylmethionine-dependent methyltransferase activity IEP HCCA
BP GO:0009059 macromolecule biosynthetic process IEP HCCA
BP GO:0016070 RNA metabolic process IEP HCCA
MF GO:0016278 lysine N-methyltransferase activity IEP HCCA
MF GO:0016279 protein-lysine N-methyltransferase activity IEP HCCA
BP GO:0016570 histone modification IEP HCCA
BP GO:0016571 histone methylation IEP HCCA
BP GO:0018022 peptidyl-lysine methylation IEP HCCA
MF GO:0018024 histone lysine N-methyltransferase activity IEP HCCA
BP GO:0018130 heterocycle biosynthetic process IEP HCCA
BP GO:0018193 peptidyl-amino acid modification IEP HCCA
BP GO:0018205 peptidyl-lysine modification IEP HCCA
BP GO:0019438 aromatic compound biosynthetic process IEP HCCA
MF GO:0030983 mismatched DNA binding IEP HCCA
BP GO:0032259 methylation IEP HCCA
BP GO:0032774 RNA biosynthetic process IEP HCCA
MF GO:0034062 5'-3' RNA polymerase activity IEP HCCA
BP GO:0034641 cellular nitrogen compound metabolic process IEP HCCA
BP GO:0034654 nucleobase-containing compound biosynthetic process IEP HCCA
BP GO:0034968 histone lysine methylation IEP HCCA
MF GO:0042054 histone methyltransferase activity IEP HCCA
CC GO:0043226 organelle IEP HCCA
CC GO:0043227 membrane-bounded organelle IEP HCCA
CC GO:0043229 intracellular organelle IEP HCCA
CC GO:0043231 intracellular membrane-bounded organelle IEP HCCA
BP GO:0043414 macromolecule methylation IEP HCCA
BP GO:0044237 cellular metabolic process IEP HCCA
BP GO:0044260 cellular macromolecule metabolic process IEP HCCA
BP GO:0044271 cellular nitrogen compound biosynthetic process IEP HCCA
BP GO:0046483 heterocycle metabolic process IEP HCCA
BP GO:0090304 nucleic acid metabolic process IEP HCCA
BP GO:0097659 nucleic acid-templated transcription IEP HCCA
MF GO:0097747 RNA polymerase activity IEP HCCA
CC GO:0110165 cellular anatomical entity IEP HCCA
MF GO:0140640 catalytic activity, acting on a nucleic acid IEP HCCA
MF GO:0140657 ATP-dependent activity IEP HCCA
BP GO:1901360 organic cyclic compound metabolic process IEP HCCA
BP GO:1901362 organic cyclic compound biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR001357 BRCT_dom 572 653
IPR001357 BRCT_dom 208 271
IPR001357 BRCT_dom 675 736
IPR001357 BRCT_dom 121 184
IPR001357 BRCT_dom 376 452
No external refs found!