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  5. LOC_Os11g08090.1

LOC_Os11g08090.1 (LOC_Os11g08090)


Aliases : LOC_Os11g08090

Description : CSI-type cellulose synthase CSC-interactive protein


Gene families : OG0001114 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001114_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os11g08090.1

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00017p00254120 evm_27.TU.AmTr_v1... Cell wall.cellulose.synthesis.cellulose synthase complex... 0.03 OrthoFinder output from all 47 species
AT2G22125 CSI1 binding 0.03 OrthoFinder output from all 47 species
Aev_g18895 CSI1 cellulose synthase CSC-interactive protein *(CSI) &... 0.02 OrthoFinder output from all 47 species
Aev_g39131 CSI1 cellulose synthase CSC-interactive protein *(CSI) &... 0.05 OrthoFinder output from all 47 species
Als_g23029 CSI1 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g24612 CSI1 cellulose synthase CSC-interactive protein *(CSI) &... 0.03 OrthoFinder output from all 47 species
Aspi01Gene70698.t1 CSI1, Aspi01Gene70698 cellulose synthase CSC-interactive protein *(CSI) &... 0.03 OrthoFinder output from all 47 species
Cba_g14852 CSI1 cellulose synthase CSC-interactive protein *(CSI) &... 0.02 OrthoFinder output from all 47 species
GSVIVT01022187001 CSI1 Cell wall.cellulose.synthesis.cellulose synthase complex... 0.03 OrthoFinder output from all 47 species
Gb_15653 No alias CSI-type cellulose synthase CSC-interactive protein 0.03 OrthoFinder output from all 47 species
LOC_Os03g19462.1 CSI1, LOC_Os03g19462 Protein CELLULOSE SYNTHASE INTERACTIVE 1 OS=Arabidopsis... 0.04 OrthoFinder output from all 47 species
Len_g09031 CSI1 cellulose synthase CSC-interactive protein *(CSI) &... 0.03 OrthoFinder output from all 47 species
Len_g11450 CSI1 cellulose synthase CSC-interactive protein *(CSI) &... 0.03 OrthoFinder output from all 47 species
Lfl_g18951 CSI1 cellulose synthase CSC-interactive protein *(CSI) &... 0.02 OrthoFinder output from all 47 species
MA_10370672g0010 No alias CSI-type cellulose synthase CSC-interactive protein 0.03 OrthoFinder output from all 47 species
MA_10434233g0010 No alias CSI-type cellulose synthase CSC-interactive protein 0.03 OrthoFinder output from all 47 species
MA_164980g0010 No alias CSI-type cellulose synthase CSC-interactive protein 0.02 OrthoFinder output from all 47 species
MA_736980g0010 CSI1 CSI-type cellulose synthase CSC-interactive protein 0.03 OrthoFinder output from all 47 species
Mp5g20900.1 CSI1 CSI-type cellulose synthase CSC-interactive protein 0.02 OrthoFinder output from all 47 species
Nbi_g07599 CSI1 cellulose synthase CSC-interactive protein *(CSI) &... 0.02 OrthoFinder output from all 47 species
Nbi_g16604 CSI1 cellulose synthase CSC-interactive protein *(CSI) &... 0.02 OrthoFinder output from all 47 species
Ore_g41278 CSI1 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Pir_g12256 CSI1 cellulose synthase CSC-interactive protein *(CSI) &... 0.03 OrthoFinder output from all 47 species
Pir_g13638 CSI1 cellulose synthase CSC-interactive protein *(CSI) &... 0.06 OrthoFinder output from all 47 species
Sacu_v1.1_s0001.g000730 CSI1 cellulose synthase CSC-interactive protein *(CSI) &... 0.02 OrthoFinder output from all 47 species
Smo78846 CSI1 Cell wall.cellulose.synthesis.cellulose synthase complex... 0.02 OrthoFinder output from all 47 species
Solyc04g054480.3.1 CSI1, Solyc04g054480 CSI-type cellulose synthase CSC-interactive protein 0.03 OrthoFinder output from all 47 species
Spa_g12362 CSI1 cellulose synthase CSC-interactive protein *(CSI) &... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP HCCA
MF GO:0003774 cytoskeletal motor activity IEP HCCA
MF GO:0003777 microtubule motor activity IEP HCCA
MF GO:0005524 ATP binding IEP HCCA
BP GO:0007017 microtubule-based process IEP HCCA
BP GO:0007018 microtubule-based movement IEP HCCA
MF GO:0008017 microtubule binding IEP HCCA
MF GO:0008092 cytoskeletal protein binding IEP HCCA
MF GO:0015631 tubulin binding IEP HCCA
BP GO:0016579 protein deubiquitination IEP HCCA
MF GO:0017076 purine nucleotide binding IEP HCCA
MF GO:0030246 carbohydrate binding IEP HCCA
MF GO:0030554 adenyl nucleotide binding IEP HCCA
MF GO:0032553 ribonucleotide binding IEP HCCA
MF GO:0032555 purine ribonucleotide binding IEP HCCA
MF GO:0032559 adenyl ribonucleotide binding IEP HCCA
MF GO:0035639 purine ribonucleoside triphosphate binding IEP HCCA
BP GO:0036211 protein modification process IEP HCCA
MF GO:0043168 anion binding IEP HCCA
BP GO:0043412 macromolecule modification IEP HCCA
BP GO:0070646 protein modification by small protein removal IEP HCCA
BP GO:0070647 protein modification by small protein conjugation or removal IEP HCCA
MF GO:0097367 carbohydrate derivative binding IEP HCCA
MF GO:0140657 ATP-dependent activity IEP HCCA
MF GO:1901265 nucleoside phosphate binding IEP HCCA
InterPro domains Description Start Stop
IPR000008 C2_dom 1991 2090
IPR000225 Armadillo 511 546
IPR000225 Armadillo 257 289
No external refs found!