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  5. LOC_Os11g06840.1

LOC_Os11g06840.1 (LOC_Os11g06840)


Aliases : LOC_Os11g06840

Description : C2H2 zinc finger transcription factor


Gene families : OG0001550 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001550_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os11g06840.1
Cluster HCCA: Cluster_16

Target Alias Description ECC score Gene Family Method Actions
AT4G27240 No alias zinc finger (C2H2 type) family protein 0.03 OrthoFinder output from all 47 species
Als_g09077 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
LOC_Os01g57650.1 LOC_Os01g57650 C2H2 zinc finger transcription factor 0.04 OrthoFinder output from all 47 species
Ore_g04292 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g27885 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g07821 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Zm00001e019606_P002 Zm00001e019606 C2H2 zinc finger transcription factor 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
CC GO:0005576 extracellular region IEP HCCA
BP GO:0006952 defense response IEP HCCA
BP GO:0009605 response to external stimulus IEP HCCA
BP GO:0009607 response to biotic stimulus IEP HCCA
BP GO:0009620 response to fungus IEP HCCA
BP GO:0043207 response to external biotic stimulus IEP HCCA
BP GO:0044419 biological process involved in interspecies interaction between organisms IEP HCCA
BP GO:0050832 defense response to fungus IEP HCCA
BP GO:0051707 response to other organism IEP HCCA
BP GO:0098542 defense response to other organism IEP HCCA

No InterPro domains available for this sequence

No external refs found!