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  5. LOC_Os11g06420.1

LOC_Os11g06420.1 (AtTLP1, TLP1, LOC_Os11g06420)


Aliases : AtTLP1, TLP1, LOC_Os11g06420

Description : transcription factor (TUB)


Gene families : OG0000251 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000251_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os11g06420.1

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00011p00238180 TLP10, AtTLP10,... RNA biosynthesis.transcriptional activation.TUB... 0.02 OrthoFinder output from all 47 species
Adi_g076986 TLP6, AtTLP6 TUB-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g076987 AtTLP3, TLP3 TUB-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g05949 AtTLP3, TLP3 TUB-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g17487 AtTLP3, TLP3 TUB-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene26806.t1 AtTLP3, TLP3,... TUB-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Azfi_s0028.g023784 AtTLP3, TLP3 TUB-type transcription factor & original description:... 0.02 OrthoFinder output from all 47 species
Dac_g19755 No alias TUB-type transcription factor & original description: none 0.06 OrthoFinder output from all 47 species
Ehy_g09015 AtTLP3, TLP3 TUB-type transcription factor & original description: none 0.01 OrthoFinder output from all 47 species
Gb_38150 AtTLP3, TLP3 transcription factor (TUB) 0.03 OrthoFinder output from all 47 species
Gb_38151 AtTLP3, TLP3 transcription factor (TUB) 0.02 OrthoFinder output from all 47 species
Lfl_g07779 AtTLP3, TLP3 TUB-type transcription factor & original description: none 0.01 OrthoFinder output from all 47 species
Lfl_g12650 TLP10, AtTLP10 TUB-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g34071 AtTLP3, TLP3 TUB-type transcription factor & original description: none 0.07 OrthoFinder output from all 47 species
Sacu_v1.1_s0089.g018709 AtTLP3, TLP3 TUB-type transcription factor & original description:... 0.01 OrthoFinder output from all 47 species
Sam_g14940 No alias TUB-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g55100 AtTLP3, TLP3 TUB-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Zm00001e015581_P001 TLP2, AtTLP2,... transcription factor (TUB) 0.02 OrthoFinder output from all 47 species
Zm00001e019166_P001 TLP10, AtTLP10,... transcription factor (TUB) 0.01 OrthoFinder output from all 47 species
Zm00001e023326_P001 TLP2, AtTLP2,... transcription factor (TUB) 0.01 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR000007 Tubby_C 116 435
IPR001810 F-box_dom 52 105
No external refs found!