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  5. LOC_Os11g06010.1

LOC_Os11g06010.1 (LHW, LOC_Os11g06010)


Aliases : LHW, LOC_Os11g06010

Description : Transcription factor LHW OS=Arabidopsis thaliana (sp|q9xin0|lhw_arath : 298.0)


Gene families : OG0001070 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001070_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os11g06010.1

Target Alias Description ECC score Gene Family Method Actions
AT1G06150 EMB1444 basic helix-loop-helix (bHLH) DNA-binding superfamily protein 0.04 OrthoFinder output from all 47 species
AT2G27230 LHW transcription factor-related 0.02 OrthoFinder output from all 47 species
AT2G31280 CPUORF7 conserved peptide upstream open reading frame 7 0.03 OrthoFinder output from all 47 species
Aev_g30832 LHW LHW/LHL-type transcription factor & original description: none 0.01 OrthoFinder output from all 47 species
Als_g61379 LHW LHW/LHL-type transcription factor & original description: none 0.01 OrthoFinder output from all 47 species
Aspi01Gene27714.t1 LHW, Aspi01Gene27714 LHW/LHL-type transcription factor & original description: none 0.01 OrthoFinder output from all 47 species
Aspi01Gene57207.t2 LHW, Aspi01Gene57207 LHW/LHL-type transcription factor & original description: none 0.01 OrthoFinder output from all 47 species
Azfi_s0007.g010536 EMB1444 LHW/LHL-type transcription factor & original... 0.03 OrthoFinder output from all 47 species
Cba_g22156 LHW LHW/LHL-type transcription factor & original description: none 0.01 OrthoFinder output from all 47 species
GSVIVT01028300001 EMB1444 Transcription factor EMB1444 OS=Arabidopsis thaliana 0.01 OrthoFinder output from all 47 species
GSVIVT01034110001 LHW Transcription factor LHW OS=Arabidopsis thaliana 0.04 OrthoFinder output from all 47 species
GSVIVT01037572001 LHW Transcription factor LHW OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
Len_g10320 EMB1444 LHW/LHL-type transcription factor & original description: none 0.01 OrthoFinder output from all 47 species
MA_10436087g0020 LHW transcription factor (bHLH) 0.03 OrthoFinder output from all 47 species
Pir_g40326 LHW LHW/LHL-type transcription factor & original description: none 0.07 OrthoFinder output from all 47 species
Solyc09g066280.4.1 EMB1444, Solyc09g066280 Transcription factor EMB1444 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
Zm00001e009089_P003 LHW, Zm00001e009089 Transcription factor LHW OS=Arabidopsis thaliana... 0.05 OrthoFinder output from all 47 species
Zm00001e015411_P002 LHW, Zm00001e015411 Transcription factor LHW OS=Arabidopsis thaliana... 0.04 OrthoFinder output from all 47 species
Zm00001e018463_P002 LHW, Zm00001e018463 Transcription factor LHW OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
Zm00001e024625_P002 LHW, Zm00001e024625 Transcription factor LHW OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
Zm00001e032637_P002 LHW, Zm00001e032637 transcription factor (bHLH) 0.01 OrthoFinder output from all 47 species
Zm00001e039416_P001 LHW, Zm00001e039416 Transcription factor LHW OS=Arabidopsis thaliana... 0.04 OrthoFinder output from all 47 species
Zm00001e041446_P005 LHW, Zm00001e041446 Transcription factor LHW OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003677 DNA binding IEP HCCA
MF GO:0005488 binding IEP HCCA
CC GO:0005634 nucleus IEP HCCA
BP GO:0006355 regulation of DNA-templated transcription IEP HCCA
MF GO:0008289 lipid binding IEP HCCA
BP GO:0009719 response to endogenous stimulus IEP HCCA
BP GO:0009725 response to hormone IEP HCCA
BP GO:0009889 regulation of biosynthetic process IEP HCCA
BP GO:0010033 response to organic substance IEP HCCA
BP GO:0010468 regulation of gene expression IEP HCCA
BP GO:0010556 regulation of macromolecule biosynthetic process IEP HCCA
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP HCCA
BP GO:0019222 regulation of metabolic process IEP HCCA
BP GO:0031323 regulation of cellular metabolic process IEP HCCA
BP GO:0031326 regulation of cellular biosynthetic process IEP HCCA
BP GO:0042221 response to chemical IEP HCCA
CC GO:0043226 organelle IEP HCCA
CC GO:0043227 membrane-bounded organelle IEP HCCA
CC GO:0043229 intracellular organelle IEP HCCA
CC GO:0043231 intracellular membrane-bounded organelle IEP HCCA
BP GO:0050896 response to stimulus IEP HCCA
BP GO:0051171 regulation of nitrogen compound metabolic process IEP HCCA
BP GO:0051252 regulation of RNA metabolic process IEP HCCA
BP GO:0060255 regulation of macromolecule metabolic process IEP HCCA
BP GO:0080090 regulation of primary metabolic process IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
BP GO:1903506 regulation of nucleic acid-templated transcription IEP HCCA
BP GO:2001141 regulation of RNA biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR025610 MYC/MYB_N 6 163
No external refs found!