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  5. LOC_Os11g05930.1

LOC_Os11g05930.1 (APRR5, PRR5, LOC_Os11g05930)


Aliases : APRR5, PRR5, LOC_Os11g05930

Description : PRR circadian clock time-of-day-dependent expressed repressor


Gene families : OG0001140 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001140_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os11g05930.1
Cluster HCCA: Cluster_145

Target Alias Description ECC score Gene Family Method Actions
Aev_g34081 APRR7, PRR7 circadian clock time-of-day-dependent expressed... 0.03 OrthoFinder output from all 47 species
GSVIVT01025087001 APRR7, PRR7 Two-component response regulator-like APRR7... 0.05 OrthoFinder output from all 47 species
Msp_g13603 PRR3, APRR3 circadian clock time-of-day-dependent expressed... 0.02 OrthoFinder output from all 47 species
Ppi_g10087 PRR3, APRR3 circadian clock time-of-day-dependent expressed... 0.04 OrthoFinder output from all 47 species
Solyc03g081240.3.1 APRR5, PRR5,... PRR circadian clock time-of-day-dependent expressed repressor 0.07 OrthoFinder output from all 47 species
Solyc10g086000.3.1 APRR7, PRR7,... PRR circadian clock time-of-day-dependent expressed repressor 0.08 OrthoFinder output from all 47 species
Zm00001e009095_P004 APRR5, PRR5,... PRR circadian clock time-of-day-dependent expressed repressor 0.04 OrthoFinder output from all 47 species
Zm00001e010231_P002 APRR5, PRR5,... PRR circadian clock time-of-day-dependent expressed repressor 0.05 OrthoFinder output from all 47 species
Zm00001e024296_P002 APRR5, PRR5,... Two-component response regulator-like PRR95 OS=Oryza... 0.06 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
BP GO:0000160 phosphorelay signal transduction system IEA Interproscan
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR010402 CCT_domain 644 686
IPR001789 Sig_transdc_resp-reg_receiver 46 157
No external refs found!