1. Home
  2. Species
  3. Oryza sativa
  4. Sequence
  5. LOC_Os11g05770.1

LOC_Os11g05770.1 (ATOFP13, OFP13, LOC_Os11g05770)


Aliases : ATOFP13, OFP13, LOC_Os11g05770

Description : transcription factor (OFP)


Gene families : OG0000209 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000209_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os11g05770.1
Cluster HCCA: Cluster_24

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00027p00241200 ATOFP5, OFP5,... RNA biosynthesis.transcriptional activation.OFP... 0.02 OrthoFinder output from all 47 species
AMTR_s00103p00131630 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.OFP... 0.05 OrthoFinder output from all 47 species
AT2G36026 No alias Ovate family protein 0.03 OrthoFinder output from all 47 species
AT4G18830 ATOFP5, OFP5 ovate family protein 5 0.02 OrthoFinder output from all 47 species
Adi_g030433 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g18435 ATOFP3, OFP3 transcriptional co-regulator *(OFP) & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g34589 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g13776 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene30219.t1 Aspi01Gene30219 transcriptional co-regulator *(OFP) & original description: none 0.02 OrthoFinder output from all 47 species
Dcu_g12032 ATOFP5, OFP5 transcriptional co-regulator *(OFP) & original description: none 0.02 OrthoFinder output from all 47 species
Dde_g25347 ATOFP5, OFP5 transcriptional co-regulator *(OFP) & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01009691001 ATOFP7, OFP7 RNA biosynthesis.transcriptional activation.OFP... 0.01 OrthoFinder output from all 47 species
Msp_g24386 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g45041 ATOFP6, OFP6 transcriptional co-regulator *(OFP) & original description: none 0.02 OrthoFinder output from all 47 species
Solyc02g085500.4.1 Solyc02g085500 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Spa_g48555 ATOFP5, OFP5 transcriptional co-regulator *(OFP) & original description: none 0.02 OrthoFinder output from all 47 species
Zm00001e024171_P001 ATOFP13, OFP13,... transcription factor (OFP) 0.02 OrthoFinder output from all 47 species
Zm00001e039400_P001 ATOFP13, OFP13,... transcription factor (OFP) 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0008289 lipid binding IEP HCCA
BP GO:0015074 DNA integration IEP HCCA
InterPro domains Description Start Stop
IPR006458 Ovate_C 197 253
No external refs found!