1. Home
  2. Species
  3. Oryza sativa
  4. Sequence
  5. LOC_Os11g05690.2

LOC_Os11g05690.2 (ATCAT6, CAT6, LOC_Os11g05690)


Aliases : ATCAT6, CAT6, LOC_Os11g05690

Description : cationic amino acid transporter (CAT)


Gene families : OG0000575 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000575_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os11g05690.2

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00002p00166780 CAT7,... Solute transport.carrier-mediated transport.APC... 0.07 OrthoFinder output from all 47 species
Adi_g022679 AAT1, CAT1 cationic amino acid transporter *(CAT) & original... 0.03 OrthoFinder output from all 47 species
Adi_g061176 CAT5 cationic amino acid transporter *(CAT) & original... 0.05 OrthoFinder output from all 47 species
Aev_g09519 AAT1, CAT1 cationic amino acid transporter *(CAT) & original... 0.02 OrthoFinder output from all 47 species
Aop_g38961 ATCAT6, CAT6 cationic amino acid transporter *(CAT) & original... 0.02 OrthoFinder output from all 47 species
Azfi_s0006.g010170 CAT7 cationic amino acid transporter *(CAT) & original... 0.04 OrthoFinder output from all 47 species
Ceric.08G046600.1 CAT7, Ceric.08G046600 cationic amino acid transporter *(CAT) & original... 0.05 OrthoFinder output from all 47 species
Dac_g21454 ATCAT6, CAT6 cationic amino acid transporter *(CAT) & original... 0.04 OrthoFinder output from all 47 species
GSVIVT01021609001 AAT1, CAT1 Solute transport.carrier-mediated transport.APC... 0.04 OrthoFinder output from all 47 species
LOC_Os01g11160.1 CAT5, LOC_Os01g11160 cationic amino acid transporter (CAT) 0.02 OrthoFinder output from all 47 species
Len_g12660 AAT1, CAT1 cationic amino acid transporter *(CAT) & original... 0.03 OrthoFinder output from all 47 species
Ore_g05822 AAT1, CAT1 cationic amino acid transporter *(CAT) & original... 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0056.g014617 ATCAT6, CAT6 not classified & original description: CDS=1-2094 0.03 OrthoFinder output from all 47 species
Solyc11g006710.2.1 CAT7, Solyc11g006710 cationic amino acid transporter (CAT) 0.04 OrthoFinder output from all 47 species
Spa_g47899 ATCAT6, CAT6 cationic amino acid transporter *(CAT) & original... 0.02 OrthoFinder output from all 47 species
Zm00001e016491_P001 CAT5, Zm00001e016491 cationic amino acid transporter (CAT) 0.03 OrthoFinder output from all 47 species
Zm00001e024163_P002 ATCAT6, CAT6,... cationic amino acid transporter (CAT) 0.03 OrthoFinder output from all 47 species
Zm00001e030690_P001 CAT8, Zm00001e030690 cationic amino acid transporter (CAT) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
CC GO:0016020 membrane IEA Interproscan
MF GO:0022857 transmembrane transporter activity IEA Interproscan
BP GO:0055085 transmembrane transport IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR029485 CAT_C 530 580
IPR002293 AA/rel_permease1 75 500
No external refs found!