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  5. LOC_Os11g05230.1

LOC_Os11g05230.1 (LOC_Os11g05230)


Aliases : LOC_Os11g05230

Description : no hits & (original description: none)


Gene families : OG0000008 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os11g05230.1

Target Alias Description ECC score Gene Family Method Actions
Aev_g24713 BRH1 E3 ubiquitin ligase *(BRH) & original description: none 0.04 OrthoFinder output from all 47 species
Ala_g01280 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.04 OrthoFinder output from all 47 species
Ala_g09797 ATL5 RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.03 OrthoFinder output from all 47 species
Aop_g26561 ATL2, TL2 RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.02 OrthoFinder output from all 47 species
Aop_g26562 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.02 OrthoFinder output from all 47 species
Aop_g70816 ATL6 RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.03 OrthoFinder output from all 47 species
Azfi_s0061.g035115 ATL2, TL2 RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.03 OrthoFinder output from all 47 species
Azfi_s0179.g056226 ATL4H not classified & original description: CDS=1-969 0.03 OrthoFinder output from all 47 species
Ceric.03G012300.1 BRH1, Ceric.03G012300 not classified & original description: pacid=50572071... 0.03 OrthoFinder output from all 47 species
Ceric.05G063000.1 Ceric.05G063000 RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.04 OrthoFinder output from all 47 species
Ceric.09G039400.1 Ceric.09G039400 not classified & original description: pacid=50588321... 0.02 OrthoFinder output from all 47 species
Ceric.09G083800.1 Ceric.09G083800 not classified & original description: pacid=50587862... 0.02 OrthoFinder output from all 47 species
Ceric.15G075700.1 Ceric.15G075700 not classified & original description: pacid=50639640... 0.03 OrthoFinder output from all 47 species
Ceric.18G040500.1 Ceric.18G040500 RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.03 OrthoFinder output from all 47 species
Dac_g07562 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.02 OrthoFinder output from all 47 species
Dac_g10168 ATL2, TL2 RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.02 OrthoFinder output from all 47 species
Dac_g11553 ATL2, TL2 RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.01 OrthoFinder output from all 47 species
Dac_g45788 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.02 OrthoFinder output from all 47 species
Dcu_g49887 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dde_g41558 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.03 OrthoFinder output from all 47 species
Ehy_g16355 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g28199 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.02 OrthoFinder output from all 47 species
Gb_39596 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Lfl_g22489 RHA3A RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.02 OrthoFinder output from all 47 species
Lfl_g31335 ATRING1, RING1 not classified & original description: none 0.02 OrthoFinder output from all 47 species
MA_10426163g0010 RHA3B no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
MA_10428061g0010 No alias no hits & (original description: none) 0.12 OrthoFinder output from all 47 species
MA_308999g0010 ATL2, TL2 RING-H2 finger protein ATL3 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
MA_391590g0010 BRH1 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Msp_g13489 ATL2, TL2 RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.02 OrthoFinder output from all 47 species
Nbi_g22098 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.03 OrthoFinder output from all 47 species
Nbi_g26349 ATL3 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g27916 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g01265 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.05 OrthoFinder output from all 47 species
Pir_g02738 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g18240 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g64599 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Sam_g35235 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.03 OrthoFinder output from all 47 species
Smo101273 No alias Protein degradation.peptide tagging.Ubiquitin... 0.03 OrthoFinder output from all 47 species
Spa_g01499 ATL6 RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.03 OrthoFinder output from all 47 species
Spa_g10479 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g40874 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.06 OrthoFinder output from all 47 species
Spa_g55527 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.05 OrthoFinder output from all 47 species
Tin_g01893 No alias RING-H2-class ATL-subclass E3 ubiquiTin ligase &... 0.01 OrthoFinder output from all 47 species
Tin_g34059 No alias RING-H2-class ATL-subclass E3 ubiquiTin ligase &... 0.02 OrthoFinder output from all 47 species
Tin_g36563 No alias RING-H2-class ATL-subclass E3 ubiquiTin ligase &... 0.02 OrthoFinder output from all 47 species
Tin_g38882 No alias RING-H2-class ATL-subclass E3 ubiquiTin ligase &... 0.07 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR001841 Znf_RING 237 281
No external refs found!