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  5. LOC_Os11g04500.1

LOC_Os11g04500.1 (CcdA, LOC_Os11g04500)


Aliases : CcdA, LOC_Os11g04500

Description : assembly factor CcdA of CCS cytochrome f/c6 maturation system (system II)


Gene families : OG0007286 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0007286_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os11g04500.1

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00061p00174500 CcdA,... Photosynthesis.photophosphorylation.cytochrome b6/f... 0.03 OrthoFinder output from all 47 species
Adi_g026246 CcdA assembly factor CcdA of CCS cytochrome f/c6 maturation... 0.02 OrthoFinder output from all 47 species
Aev_g07709 CcdA assembly factor CcdA of CCS cytochrome f/c6 maturation... 0.03 OrthoFinder output from all 47 species
Ala_g10332 CcdA assembly factor CcdA of CCS cytochrome f/c6 maturation... 0.04 OrthoFinder output from all 47 species
Aob_g06460 CcdA assembly factor CcdA of CCS cytochrome f/c6 maturation... 0.03 OrthoFinder output from all 47 species
Aop_g12125 CcdA assembly factor CcdA of CCS cytochrome f/c6 maturation... 0.04 OrthoFinder output from all 47 species
Cba_g16816 CcdA assembly factor CcdA of CCS cytochrome f/c6 maturation... 0.02 OrthoFinder output from all 47 species
Ceric.02G048700.1 CcdA, Ceric.02G048700 assembly factor CcdA of CCS cytochrome f/c6 maturation... 0.06 OrthoFinder output from all 47 species
Cpa|evm.model.tig00001376.11 CcdA Photosynthesis.photophosphorylation.cytochrome b6/f... 0.01 OrthoFinder output from all 47 species
Dac_g07775 CcdA assembly factor CcdA of CCS cytochrome f/c6 maturation... 0.03 OrthoFinder output from all 47 species
Dde_g04751 CcdA assembly factor CcdA of CCS cytochrome f/c6 maturation... 0.02 OrthoFinder output from all 47 species
GSVIVT01014430001 CcdA Photosynthesis.photophosphorylation.cytochrome b6/f... 0.03 OrthoFinder output from all 47 species
Gb_35619 CcdA assembly factor CcdA of CCS cytochrome f/c6 maturation... 0.06 OrthoFinder output from all 47 species
Lfl_g28455 CcdA assembly factor CcdA of CCS cytochrome f/c6 maturation... 0.02 OrthoFinder output from all 47 species
Nbi_g07517 CcdA assembly factor CcdA of CCS cytochrome f/c6 maturation... 0.04 OrthoFinder output from all 47 species
Ore_g21830 CcdA assembly factor CcdA of CCS cytochrome f/c6 maturation... 0.02 OrthoFinder output from all 47 species
Ppi_g15921 CcdA assembly factor CcdA of CCS cytochrome f/c6 maturation... 0.03 OrthoFinder output from all 47 species
Sam_g09743 No alias assembly factor CcdA of CCS cytochrome f/c6 maturation... 0.02 OrthoFinder output from all 47 species
Solyc07g063570.4.1 CcdA, Solyc07g063570 assembly factor CcdA of CCS cytochrome f/c6 maturation... 0.08 OrthoFinder output from all 47 species
Spa_g16978 CcdA assembly factor CcdA of CCS cytochrome f/c6 maturation... 0.02 OrthoFinder output from all 47 species
Tin_g31999 CcdA assembly factor CcdA of CCS cytochrome f/c6 maturation... 0.04 OrthoFinder output from all 47 species
Zm00001e009192_P002 CcdA, Zm00001e009192 assembly factor CcdA of CCS cytochrome f/c6 maturation... 0.06 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
CC GO:0016020 membrane IEA Interproscan
BP GO:0017004 cytochrome complex assembly IEA Interproscan
BP GO:0055114 obsolete oxidation-reduction process IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004497 monooxygenase activity IEP HCCA
MF GO:0010277 chlorophyllide a oxygenase [overall] activity IEP HCCA
MF GO:0016701 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen IEP HCCA
MF GO:0016703 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of one atom of oxygen (internal monooxygenases or internal mixed function oxidases) IEP HCCA
MF GO:0016730 oxidoreductase activity, acting on iron-sulfur proteins as donors IEP HCCA
MF GO:0042626 ATPase-coupled transmembrane transporter activity IEP HCCA
MF GO:0051536 iron-sulfur cluster binding IEP HCCA
MF GO:0051537 2 iron, 2 sulfur cluster binding IEP HCCA
MF GO:0051540 metal cluster binding IEP HCCA
InterPro domains Description Start Stop
IPR003834 Cyt_c_assmbl_TM_dom 149 356
No external refs found!