LOC_Os11g03780.2 (ASD1, ATASD1, ARAF,...)

Aliases : ASD1, ATASD1, ARAF, ARAF1, LOC_Os11g03780

Description : bifunctional alpha-L-arabinofuranosidase and beta-D-xylosidase (ASD)

Gene families : OG0002834 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002834_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: LOC_Os11g03780.2
Cluster	HCCA: Cluster_46

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00095p00169830	ASD1, ATASD1,...	Cell wall.pectin.rhamnogalacturonan I.modification and...	0.03	OrthoFinder output from all 47 species
Adi_g108255	ASD1, ATASD1, ARAF, ARAF1	bifunctional alpha-L-arabinofuranosidase and...	0.02	OrthoFinder output from all 47 species
Aob_g11623	ASD1, ATASD1, ARAF, ARAF1	bifunctional alpha-L-arabinofuranosidase and...	0.02	OrthoFinder output from all 47 species
Gb_12232	ASD1, ATASD1, ARAF, ARAF1	bifunctional alpha-L-arabinofuranosidase and...	0.04	OrthoFinder output from all 47 species
Nbi_g34628	ASD1, ATASD1, ARAF, ARAF1	bifunctional alpha-L-arabinofuranosidase and...	0.03	OrthoFinder output from all 47 species
Solyc10g077080.3.1	ASD1, ATASD1,...	bifunctional alpha-L-arabinofuranosidase and...	0.03	OrthoFinder output from all 47 species
Solyc10g081120.3.1	ASD1, ATASD1,...	bifunctional alpha-L-arabinofuranosidase and...	0.03	OrthoFinder output from all 47 species
Tin_g14859	ASD1, ATASD1, ARAF, ARAF1	bifunctional alpha-L-arabinofuranosidase and...	0.03	OrthoFinder output from all 47 species
Zm00001e001505_P001	ASD1, ATASD1,...	bifunctional alpha-L-arabinofuranosidase and...	0.03	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0004553	hydrolase activity, hydrolyzing O-glycosyl compounds	None	Extended
BP	GO:0005975	carbohydrate metabolic process	None	Extended
BP	GO:0005996	monosaccharide metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
MF	GO:0016787	hydrolase activity	None	Extended
MF	GO:0016798	hydrolase activity, acting on glycosyl bonds	None	Extended
BP	GO:0019321	pentose metabolic process	None	Extended
BP	GO:0019566	arabinose metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0044281	small molecule metabolic process	None	Extended
BP	GO:0046373	L-arabinose metabolic process	IEA	Interproscan
MF	GO:0046556	alpha-L-arabinofuranosidase activity	IEA	Interproscan
BP	GO:0071704	organic substance metabolic process	None	Extended

Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Start	Stop
IPR010720	Alpha-L-AF_C	454	639

External Links

No external refs found!