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  5. LOC_Os11g03430.1

LOC_Os11g03430.1 (CDC45, LOC_Os11g03430)


Aliases : CDC45, LOC_Os11g03430

Description : CDC45 cell cycle auxiliary factor


Gene families : OG0008920 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0008920_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os11g03430.1
Cluster HCCA: Cluster_27

Target Alias Description ECC score Gene Family Method Actions
AT3G25100 CDC45 cell division cycle 45 0.2 OrthoFinder output from all 47 species
Aop_g04657 CDC45 cell cycle auxiliary factor *(CDC45) & original description: none 0.09 OrthoFinder output from all 47 species
Aspi01Gene50014.t1 CDC45, Aspi01Gene50014 cell cycle auxiliary factor *(CDC45) & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.22G068600.1 CDC45, Ceric.22G068600 cell cycle auxiliary factor *(CDC45) & original... 0.07 OrthoFinder output from all 47 species
Cpa|evm.model.tig00001302.6 No alias Cell cycle.interphase.DNA replication.initiation.CDC45... 0.02 OrthoFinder output from all 47 species
Cre06.g270250 No alias Cell cycle.interphase.DNA replication.initiation.CDC45... 0.03 OrthoFinder output from all 47 species
Dcu_g14842 CDC45 cell cycle auxiliary factor *(CDC45) & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01000797001 CDC45 Cell cycle.interphase.DNA replication.initiation.CDC45... 0.21 OrthoFinder output from all 47 species
Gb_40696 CDC45 CDC45 cell cycle auxiliary factor 0.12 OrthoFinder output from all 47 species
MA_94094g0010 CDC45 CDC45 cell cycle auxiliary factor 0.1 OrthoFinder output from all 47 species
Mp6g20220.1 CDC45 CDC45 cell cycle auxiliary factor 0.05 OrthoFinder output from all 47 species
Msp_g11586 CDC45 cell cycle auxiliary factor *(CDC45) & original description: none 0.14 OrthoFinder output from all 47 species
Nbi_g09206 CDC45 cell cycle auxiliary factor *(CDC45) & original description: none 0.05 OrthoFinder output from all 47 species
Ppi_g15977 CDC45 cell cycle auxiliary factor *(CDC45) & original description: none 0.06 OrthoFinder output from all 47 species
Sacu_v1.1_s0091.g018847 CDC45 cell cycle auxiliary factor *(CDC45) & original... 0.03 OrthoFinder output from all 47 species
Solyc09g059440.1.1 CDC45, Solyc09g059440 CDC45 cell cycle auxiliary factor 0.11 OrthoFinder output from all 47 species
Tin_g06817 CDC45 cell cycle auxiliary factor *(CDC45) & original description: none 0.08 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
BP GO:0006270 DNA replication initiation IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP HCCA
MF GO:0004672 protein kinase activity IEP HCCA
MF GO:0005524 ATP binding IEP HCCA
BP GO:0006468 protein phosphorylation IEP HCCA
MF GO:0015399 primary active transmembrane transporter activity IEP HCCA
MF GO:0016301 kinase activity IEP HCCA
BP GO:0016310 phosphorylation IEP HCCA
MF GO:0016773 phosphotransferase activity, alcohol group as acceptor IEP HCCA
MF GO:0017076 purine nucleotide binding IEP HCCA
CC GO:0018995 host cellular component IEP HCCA
MF GO:0030554 adenyl nucleotide binding IEP HCCA
MF GO:0032553 ribonucleotide binding IEP HCCA
MF GO:0032555 purine ribonucleotide binding IEP HCCA
MF GO:0032559 adenyl ribonucleotide binding IEP HCCA
CC GO:0033643 host cell part IEP HCCA
CC GO:0033646 host intracellular part IEP HCCA
CC GO:0033647 host intracellular organelle IEP HCCA
CC GO:0033648 host intracellular membrane-bounded organelle IEP HCCA
MF GO:0035639 purine ribonucleoside triphosphate binding IEP HCCA
MF GO:0036094 small molecule binding IEP HCCA
CC GO:0042025 host cell nucleus IEP HCCA
MF GO:0042626 ATPase-coupled transmembrane transporter activity IEP HCCA
MF GO:0043168 anion binding IEP HCCA
MF GO:0097367 carbohydrate derivative binding IEP HCCA
MF GO:0140096 catalytic activity, acting on a protein IEP HCCA
MF GO:1901265 nucleoside phosphate binding IEP HCCA
InterPro domains Description Start Stop
IPR003874 CDC45 31 602
No external refs found!