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  5. LOC_Os11g02610.1

LOC_Os11g02610.1 (RPT2, LOC_Os11g02610)


Aliases : RPT2, LOC_Os11g02610

Description : Root phototropism protein 2 OS=Arabidopsis thaliana (sp|q682s0|rpt2_arath : 372.0)


Gene families : OG0017031 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0017031_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os11g02610.1
Cluster HCCA: Cluster_79

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00077p00161250 RPT2,... Root phototropism protein 2 OS=Arabidopsis thaliana 0.04 OrthoFinder output from all 47 species
AT2G30520 RPT2 Phototropic-responsive NPH3 family protein 0.05 OrthoFinder output from all 47 species
GSVIVT01024542001 No alias Root phototropism protein 2 OS=Arabidopsis thaliana 0.05 OrthoFinder output from all 47 species
Solyc07g043130.3.1 RPT2, Solyc07g043130 Root phototropism protein 2 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
Zm00001e009259_P001 RPT2, Zm00001e009259 Root phototropism protein 2 OS=Arabidopsis thaliana... 0.08 OrthoFinder output from all 47 species
Zm00001e039271_P001 RPT2, Zm00001e039271 Root phototropism protein 2 OS=Arabidopsis thaliana... 0.11 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0005488 binding IEP HCCA
MF GO:0005515 protein binding IEP HCCA
MF GO:0008270 zinc ion binding IEP HCCA
MF GO:0008374 O-acyltransferase activity IEP HCCA
MF GO:0016491 oxidoreductase activity IEP HCCA
MF GO:0016614 oxidoreductase activity, acting on CH-OH group of donors IEP HCCA
MF GO:0030151 molybdenum ion binding IEP HCCA
MF GO:0043167 ion binding IEP HCCA
MF GO:0043169 cation binding IEP HCCA
MF GO:0046872 metal ion binding IEP HCCA
MF GO:0046914 transition metal ion binding IEP HCCA
MF GO:0046983 protein dimerization activity IEP HCCA
MF GO:0050660 flavin adenine dinucleotide binding IEP HCCA
BP GO:0055114 obsolete oxidation-reduction process IEP HCCA
InterPro domains Description Start Stop
IPR027356 NPH3_dom 170 427
No external refs found!