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LOC_Os11g02440.1 (LOC_Os11g02440)


Aliases : LOC_Os11g02440

Description : Probable chalcone--flavonone isomerase 3 OS=Arabidopsis thaliana (sp|q8vzw3|cfi3_arath : 235.0)


Gene families : OG0002319 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002319_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os11g02440.1
Cluster HCCA: Cluster_28

Target Alias Description ECC score Gene Family Method Actions
AT5G05270 No alias Chalcone-flavanone isomerase family protein 0.03 OrthoFinder output from all 47 species
Als_g37009 No alias chalcone isomerase & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g07581 No alias chalcone isomerase & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g01570 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g37318 No alias chalcone isomerase & original description: none 0.02 OrthoFinder output from all 47 species
Dac_g11451 No alias chalcone isomerase & original description: none 0.02 OrthoFinder output from all 47 species
Dac_g45122 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g49503 No alias chalcone isomerase & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g11422 No alias chalcone isomerase & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01032685001 No alias Probable chalcone--flavonone isomerase 3 OS=Arabidopsis thaliana 0.05 OrthoFinder output from all 47 species
Len_g01030 No alias chalcone isomerase & original description: none 0.04 OrthoFinder output from all 47 species
Len_g10237 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Lfl_g30159 No alias chalcone isomerase & original description: none 0.02 OrthoFinder output from all 47 species
MA_502949g0010 No alias Probable chalcone--flavonone isomerase 3 OS=Arabidopsis... 0.05 OrthoFinder output from all 47 species
Mp5g01410.1 No alias Probable chalcone--flavonone isomerase 3 OS=Arabidopsis... 0.04 OrthoFinder output from all 47 species
Msp_g12855 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Msp_g25257 No alias chalcone isomerase & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g31384 No alias chalcone isomerase & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g11170 No alias chalcone isomerase & original description: none 0.03 OrthoFinder output from all 47 species
Pp3c4_25770V3.1 Pp3c4_25770 Chalcone-flavanone isomerase family protein 0.02 OrthoFinder output from all 47 species
Ppi_g38923 No alias chalcone isomerase & original description: none 0.02 OrthoFinder output from all 47 species
Solyc05g052240.3.1 Solyc05g052240 Probable chalcone--flavonone isomerase 3 OS=Arabidopsis... 0.08 OrthoFinder output from all 47 species
Spa_g06274 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g10892 No alias chalcone isomerase & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e020880_P001 Zm00001e020880 Probable chalcone--flavonone isomerase 3 OS=Arabidopsis... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0016872 intramolecular lyase activity IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0000287 magnesium ion binding IEP HCCA
MF GO:0003700 DNA-binding transcription factor activity IEP HCCA
MF GO:0005506 iron ion binding IEP HCCA
MF GO:0008374 O-acyltransferase activity IEP HCCA
MF GO:0010333 terpene synthase activity IEP HCCA
MF GO:0015291 secondary active transmembrane transporter activity IEP HCCA
MF GO:0015297 antiporter activity IEP HCCA
MF GO:0016491 oxidoreductase activity IEP HCCA
MF GO:0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen IEP HCCA
MF GO:0016835 carbon-oxygen lyase activity IEP HCCA
MF GO:0016838 carbon-oxygen lyase activity, acting on phosphates IEP HCCA
MF GO:0020037 heme binding IEP HCCA
MF GO:0042910 xenobiotic transmembrane transporter activity IEP HCCA
MF GO:0043169 cation binding IEP HCCA
MF GO:0046872 metal ion binding IEP HCCA
MF GO:0046906 tetrapyrrole binding IEP HCCA
MF GO:0046914 transition metal ion binding IEP HCCA
BP GO:0055114 obsolete oxidation-reduction process IEP HCCA
MF GO:0140110 transcription regulator activity IEP HCCA
InterPro domains Description Start Stop
IPR016087 Chalcone_isomerase 15 213
No external refs found!