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  5. LOC_Os10g42540.1

LOC_Os10g42540.1 (LOC_Os10g42540)


Aliases : LOC_Os10g42540

Description : component NDUFB10 of NADH dehydrogenase beta subcomplex


Gene families : OG0007856 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0007856_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os10g42540.1
Cluster HCCA: Cluster_147

Target Alias Description ECC score Gene Family Method Actions
AT1G49140 No alias Complex I subunit NDUFS6 0.06 OrthoFinder output from all 47 species
AT3G18410 No alias Complex I subunit NDUFS6 0.14 OrthoFinder output from all 47 species
Als_g55986 No alias component *(NDUFB10/PDSW) of NADH dehydrogenase beta... 0.02 OrthoFinder output from all 47 species
Ceric.09G041700.1 Ceric.09G041700 component *(NDUFB10/PDSW) of NADH dehydrogenase beta... 0.02 OrthoFinder output from all 47 species
Cpa|evm.model.tig00021133.9 No alias Cellular respiration.oxidative phosphorylation.NADH... 0.03 OrthoFinder output from all 47 species
GSVIVT01008282001 No alias Cellular respiration.oxidative phosphorylation.NADH... 0.04 OrthoFinder output from all 47 species
Mp3g16160.1 No alias component NDUFB10 of NADH dehydrogenase beta subcomplex 0.14 OrthoFinder output from all 47 species
Sam_g12743 No alias component *(NDUFB10/PDSW) of NADH dehydrogenase beta... 0.02 OrthoFinder output from all 47 species
Solyc12g036790.2.1 Solyc12g036790 component NDUFB10 of NADH dehydrogenase beta subcomplex 0.12 OrthoFinder output from all 47 species
Zm00001e012993_P001 Zm00001e012993 component NDUFB10 of NADH dehydrogenase beta subcomplex 0.07 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003954 NADH dehydrogenase activity IEP HCCA
MF GO:0003955 NAD(P)H dehydrogenase (quinone) activity IEP HCCA
CC GO:0005739 mitochondrion IEP HCCA
CC GO:0005787 signal peptidase complex IEP HCCA
BP GO:0006091 generation of precursor metabolites and energy IEP HCCA
BP GO:0006465 signal peptide processing IEP HCCA
BP GO:0006518 peptide metabolic process IEP HCCA
MF GO:0008137 NADH dehydrogenase (ubiquinone) activity IEP HCCA
MF GO:0009055 electron transfer activity IEP HCCA
MF GO:0015399 primary active transmembrane transporter activity IEP HCCA
MF GO:0015453 oxidoreduction-driven active transmembrane transporter activity IEP HCCA
BP GO:0016485 protein processing IEP HCCA
MF GO:0016651 oxidoreductase activity, acting on NAD(P)H IEP HCCA
MF GO:0016655 oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor IEP HCCA
BP GO:0022613 ribonucleoprotein complex biogenesis IEP HCCA
MF GO:0022804 active transmembrane transporter activity IEP HCCA
BP GO:0022900 electron transport chain IEP HCCA
BP GO:0022904 respiratory electron transport chain IEP HCCA
BP GO:0042254 ribosome biogenesis IEP HCCA
MF GO:0042626 ATPase-coupled transmembrane transporter activity IEP HCCA
CC GO:0043226 organelle IEP HCCA
CC GO:0043229 intracellular organelle IEP HCCA
BP GO:0043603 amide metabolic process IEP HCCA
BP GO:0044085 cellular component biogenesis IEP HCCA
MF GO:0050136 NADH dehydrogenase (quinone) activity IEP HCCA
MF GO:0051536 iron-sulfur cluster binding IEP HCCA
MF GO:0051540 metal cluster binding IEP HCCA
BP GO:0051604 protein maturation IEP HCCA
CC GO:0140534 endoplasmic reticulum protein-containing complex IEP HCCA
CC GO:1905368 peptidase complex IEP HCCA
InterPro domains Description Start Stop
IPR019377 NADH_UbQ_OxRdtase_su10 24 81
No external refs found!