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  5. LOC_Os10g42320.1

LOC_Os10g42320.1 (LOC_Os10g42320)


Aliases : LOC_Os10g42320

Description : pre-60S subunit nuclear export factor (NMD3)


Gene families : OG0004348 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0004348_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os10g42320.1
Cluster HCCA: Cluster_142

Target Alias Description ECC score Gene Family Method Actions
Adi_g113237 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g21524 No alias pre-60S ribosomal-subunit proteome nuclear export factor... 0.02 OrthoFinder output from all 47 species
Pnu_g08099 No alias pre-60S ribosomal-subunit proteome nuclear export factor... 0.03 OrthoFinder output from all 47 species
Sam_g16142 No alias pre-60S ribosomal-subunit proteome nuclear export factor... 0.02 OrthoFinder output from all 47 species
Sam_g16143 No alias pre-60S ribosomal-subunit proteome nuclear export factor... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0006352 DNA-templated transcription initiation IEP HCCA
MF GO:0008047 enzyme activator activity IEP HCCA
BP GO:0009059 macromolecule biosynthetic process IEP HCCA
BP GO:0016070 RNA metabolic process IEP HCCA
BP GO:0018130 heterocycle biosynthetic process IEP HCCA
MF GO:0019208 phosphatase regulator activity IEP HCCA
MF GO:0019211 phosphatase activator activity IEP HCCA
BP GO:0019438 aromatic compound biosynthetic process IEP HCCA
MF GO:0030234 enzyme regulator activity IEP HCCA
BP GO:0032774 RNA biosynthetic process IEP HCCA
BP GO:0034654 nucleobase-containing compound biosynthetic process IEP HCCA
MF GO:0098772 molecular function regulator activity IEP HCCA
MF GO:0140677 molecular function activator activity IEP HCCA
BP GO:1901362 organic cyclic compound biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR007064 Nmd3_N 26 258
No external refs found!