LOC_Os10g40660.1 (LOC_Os10g40660)


Aliases : LOC_Os10g40660

Description : C2H2 zinc finger transcription factor


Gene families : OG0000238 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000238_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os10g40660.1

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00106p00120810 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.C2H2 zinc... 0.03 OrthoFinder output from all 47 species
AT2G28710 No alias C2H2-type zinc finger family protein 0.02 OrthoFinder output from all 47 species
AT3G10470 No alias C2H2-type zinc finger family protein 0.04 OrthoFinder output from all 47 species
AT3G19580 AZF2, ZF2 zinc-finger protein 2 0.02 OrthoFinder output from all 47 species
AT3G53600 No alias C2H2-type zinc finger family protein 0.04 OrthoFinder output from all 47 species
AT5G03510 No alias C2H2-type zinc finger family protein 0.03 OrthoFinder output from all 47 species
AT5G04390 No alias C2H2-type zinc finger family protein 0.04 OrthoFinder output from all 47 species
Adi_g032166 No alias regulatory protein *(DAZ) of male germ cell division &... 0.02 OrthoFinder output from all 47 species
Adi_g046188 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g055671 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g13495 No alias regulatory protein *(DAZ) of male germ cell division &... 0.02 OrthoFinder output from all 47 species
Azfi_s0577.g078251 No alias regulatory protein *(DAZ) of male germ cell division &... 0.02 OrthoFinder output from all 47 species
Cba_g37408 No alias regulatory protein *(DAZ) of male germ cell division &... 0.02 OrthoFinder output from all 47 species
Dac_g44471 No alias regulatory protein *(DAZ) of male germ cell division &... 0.02 OrthoFinder output from all 47 species
Ehy_g15214 AZF2, ZF2 C2H2-type subclass ZAT transcription factor & original... 0.02 OrthoFinder output from all 47 species
GSVIVT01018162001 No alias RNA biosynthesis.transcriptional activation.C2H2 zinc... 0.01 OrthoFinder output from all 47 species
GSVIVT01023887001 No alias RNA biosynthesis.transcriptional activation.C2H2 zinc... 0.03 OrthoFinder output from all 47 species
GSVIVT01037364001 No alias Zinc finger protein ZAT2 OS=Arabidopsis thaliana 0.04 OrthoFinder output from all 47 species
Gb_06484 AZF1, ZF1 C2H2 zinc finger transcription factor 0.04 OrthoFinder output from all 47 species
Gb_06485 No alias C2H2 zinc finger transcription factor 0.03 OrthoFinder output from all 47 species
Gb_10419 No alias C2H2 zinc finger transcription factor 0.04 OrthoFinder output from all 47 species
Gb_16414 No alias C2H2 zinc finger transcription factor 0.02 OrthoFinder output from all 47 species
Gb_40151 No alias C2H2 zinc finger transcription factor 0.04 OrthoFinder output from all 47 species
LOC_Os06g51140.1 LOC_Os06g51140 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Len_g09007 No alias regulatory protein *(DAZ) of male germ cell division &... 0.02 OrthoFinder output from all 47 species
Lfl_g37210 No alias regulatory protein *(DAZ) of male germ cell division &... 0.04 OrthoFinder output from all 47 species
Msp_g25888 No alias regulatory protein *(DAZ) of male germ cell division &... 0.02 OrthoFinder output from all 47 species
Ppi_g12963 No alias regulatory protein *(DAZ) of male germ cell division &... 0.02 OrthoFinder output from all 47 species
Ppi_g62772 No alias regulatory protein *(DAZ) of male germ cell division &... 0.02 OrthoFinder output from all 47 species
Sam_g35489 No alias regulatory protein *(DAZ) of male germ cell division &... 0.02 OrthoFinder output from all 47 species
Solyc01g090840.3.1 Solyc01g090840 C2H2 zinc finger transcription factor 0.04 OrthoFinder output from all 47 species
Solyc02g088670.1.1 Solyc02g088670 C2H2 zinc finger transcription factor 0.11 OrthoFinder output from all 47 species
Solyc06g005180.1.1 Solyc06g005180 C2H2 zinc finger transcription factor 0.03 OrthoFinder output from all 47 species
Solyc06g060740.3.1 Solyc06g060740 C2H2 zinc finger transcription factor 0.01 OrthoFinder output from all 47 species
Solyc06g074800.1.1 Solyc06g074800 C2H2 zinc finger transcription factor 0.02 OrthoFinder output from all 47 species
Solyc09g008440.1.1 Solyc09g008440 C2H2 zinc finger transcription factor 0.03 OrthoFinder output from all 47 species
Zm00001e002022_P001 Zm00001e002022 C2H2 zinc finger transcription factor 0.04 OrthoFinder output from all 47 species
Zm00001e002063_P001 AZF1, ZF1, Zm00001e002063 C2H2 zinc finger transcription factor 0.02 OrthoFinder output from all 47 species
Zm00001e002344_P001 Zm00001e002344 C2H2 zinc finger transcription factor 0.07 OrthoFinder output from all 47 species
Zm00001e019349_P001 Zm00001e019349 C2H2 zinc finger transcription factor 0.02 OrthoFinder output from all 47 species
Zm00001e019350_P001 Zm00001e019350 C2H2 zinc finger transcription factor 0.01 OrthoFinder output from all 47 species
Zm00001e023171_P001 Zm00001e023171 C2H2 zinc finger transcription factor 0.03 OrthoFinder output from all 47 species
Zm00001e029605_P001 RHL41, ZAT12,... C2H2 zinc finger transcription factor 0.03 OrthoFinder output from all 47 species
Zm00001e038054_P001 Zm00001e038054 C2H2 zinc finger transcription factor 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
MF GO:0005092 GDP-dissociation inhibitor activity IEP HCCA
MF GO:0005094 Rho GDP-dissociation inhibitor activity IEP HCCA
MF GO:0005507 copper ion binding IEP HCCA
CC GO:0005737 cytoplasm IEP HCCA
BP GO:0009605 response to external stimulus IEP HCCA
BP GO:0009606 tropism IEP HCCA
BP GO:0010274 hydrotropism IEP HCCA
MF GO:0015018 galactosylgalactosylxylosylprotein 3-beta-glucuronosyltransferase activity IEP HCCA
MF GO:0015020 glucuronosyltransferase activity IEP HCCA
MF GO:0030695 GTPase regulator activity IEP HCCA
MF GO:0060589 nucleoside-triphosphatase regulator activity IEP HCCA
MF GO:0140677 molecular function activator activity IEP HCCA

No InterPro domains available for this sequence

No external refs found!