LOC_Os10g39970.1 (LOC_Os10g39970)


Aliases : LOC_Os10g39970

Description : no hits & (original description: none)


Gene families : OG0000261 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000261_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os10g39970.1

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00001p00271600 evm_27.TU.AmTr_v1... NDR1/HIN1-like protein 12 OS=Arabidopsis thaliana 0.04 OrthoFinder output from all 47 species
AMTR_s00003p00244400 NHL25,... NDR1/HIN1-like protein 6 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
AMTR_s00140p00027980 evm_27.TU.AmTr_v1... Uncharacterized protein At1g08160 OS=Arabidopsis thaliana 0.05 OrthoFinder output from all 47 species
AMTR_s00171p00061900 NHL25,... NDR1/HIN1-like protein 6 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
AT1G08160 No alias Late embryogenesis abundant (LEA) hydroxyproline-rich... 0.07 OrthoFinder output from all 47 species
AT1G17620 No alias Late embryogenesis abundant (LEA) hydroxyproline-rich... 0.03 OrthoFinder output from all 47 species
AT1G54540 No alias Late embryogenesis abundant (LEA) hydroxyproline-rich... 0.06 OrthoFinder output from all 47 species
AT1G61760 No alias Late embryogenesis abundant (LEA) hydroxyproline-rich... 0.06 OrthoFinder output from all 47 species
AT1G65690 No alias Late embryogenesis abundant (LEA) hydroxyproline-rich... 0.03 OrthoFinder output from all 47 species
AT2G27080 No alias Late embryogenesis abundant (LEA) hydroxyproline-rich... 0.03 OrthoFinder output from all 47 species
AT2G35980 NHL10, YLS9, ATNHL10 Late embryogenesis abundant (LEA) hydroxyproline-rich... 0.03 OrthoFinder output from all 47 species
AT3G44220 No alias Late embryogenesis abundant (LEA) hydroxyproline-rich... 0.03 OrthoFinder output from all 47 species
AT3G52460 No alias hydroxyproline-rich glycoprotein family protein 0.03 OrthoFinder output from all 47 species
AT4G05220 No alias Late embryogenesis abundant (LEA) hydroxyproline-rich... 0.07 OrthoFinder output from all 47 species
AT5G06330 No alias Late embryogenesis abundant (LEA) hydroxyproline-rich... 0.03 OrthoFinder output from all 47 species
AT5G22870 No alias Late embryogenesis abundant (LEA) hydroxyproline-rich... 0.08 OrthoFinder output from all 47 species
Adi_g109010 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g12132 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g12411 NHL10, YLS9, ATNHL10 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g13902 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g03459 NHL10, YLS9, ATNHL10 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g40012 NHL10, YLS9, ATNHL10 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene05239.t1 Aspi01Gene05239 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene05257.t1 NHL10, YLS9,... not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene05258.t2 NHL10, YLS9,... not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene05261.t1 NHL10, YLS9,... not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene05265.t1 NHL10, YLS9,... not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene05267.t1 NHL10, YLS9,... not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene07845.t1 NHL10, YLS9,... not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.07G080900.1 Ceric.07G080900 not classified & original description: pacid=50627275... 0.02 OrthoFinder output from all 47 species
Ceric.16G075400.1 Ceric.16G075400 not classified & original description: pacid=50589266... 0.04 OrthoFinder output from all 47 species
Ceric.29G073800.1 Ceric.29G073800 not classified & original description: pacid=50625140... 0.04 OrthoFinder output from all 47 species
Ceric.30G026900.1 NHL25, Ceric.30G026900 not classified & original description: pacid=50608145... 0.03 OrthoFinder output from all 47 species
Dde_g09875 NHL10, YLS9, ATNHL10 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g02072 NHL10, YLS9, ATNHL10 not classified & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01012622001 No alias No description available 0.05 OrthoFinder output from all 47 species
GSVIVT01031450001 No alias Uncharacterized protein At1g08160 OS=Arabidopsis thaliana 0.07 OrthoFinder output from all 47 species
GSVIVT01033199001 No alias NDR1/HIN1-like protein 6 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
GSVIVT01037448001 No alias NDR1/HIN1-like protein 13 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
Gb_00667 No alias NDR1/HIN1-like protein 10 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
Gb_01957 NHL25 NDR1/HIN1-like protein 6 OS=Arabidopsis thaliana... 0.06 OrthoFinder output from all 47 species
Gb_14222 No alias NDR1/HIN1-like protein 10 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
Gb_26587 NHL10, YLS9, ATNHL10 NDR1/HIN1-like protein 10 OS=Arabidopsis thaliana... 0.05 OrthoFinder output from all 47 species
Gb_26588 No alias NDR1/HIN1-like protein 10 OS=Arabidopsis thaliana... 0.04 OrthoFinder output from all 47 species
Gb_26590 NHL10, YLS9, ATNHL10 NDR1/HIN1-like protein 10 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
Gb_27244 NHL12 NDR1/HIN1-like protein 12 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
LOC_Os01g39290.1 LOC_Os01g39290 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
LOC_Os01g59680.1 LOC_Os01g59680 NDR1/HIN1-like protein 13 OS=Arabidopsis thaliana... 0.04 OrthoFinder output from all 47 species
LOC_Os01g64450.1 LOC_Os01g64450 NDR1/HIN1-like protein 3 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
LOC_Os02g33550.1 LOC_Os02g33550 NDR1/HIN1-like protein 1 OS=Arabidopsis thaliana... 0.08 OrthoFinder output from all 47 species
LOC_Os04g33990.1 LOC_Os04g33990 NDR1/HIN1-like protein 1 OS=Arabidopsis thaliana... 0.05 OrthoFinder output from all 47 species
LOC_Os04g58090.1 LOC_Os04g58090 NDR1/HIN1-like protein 6 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
LOC_Os09g09460.1 LOC_Os09g09460 NDR1/HIN1-like protein 6 OS=Arabidopsis thaliana... 0.04 OrthoFinder output from all 47 species
LOC_Os11g05860.1 LOC_Os11g05860 NDR1/HIN1-like protein 1 OS=Arabidopsis thaliana... 0.04 OrthoFinder output from all 47 species
Len_g16671 NHL25 not classified & original description: none 0.02 OrthoFinder output from all 47 species
MA_100525g0010 No alias NDR1/HIN1-like protein 26 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
MA_10155182g0010 NHL10, YLS9, ATNHL10 NDR1/HIN1-like protein 10 OS=Arabidopsis thaliana... 0.04 OrthoFinder output from all 47 species
MA_10429254g0010 NHL10, YLS9, ATNHL10 NDR1/HIN1-like protein 10 OS=Arabidopsis thaliana... 0.04 OrthoFinder output from all 47 species
MA_10429254g0020 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
MA_112233g0010 NHL10, YLS9, ATNHL10 NDR1/HIN1-like protein 2 OS=Arabidopsis thaliana... 0.04 OrthoFinder output from all 47 species
MA_180376g0010 NHL25 NDR1/HIN1-like protein 6 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
MA_27406g0010 No alias NDR1/HIN1-like protein 26 OS=Arabidopsis thaliana... 0.05 OrthoFinder output from all 47 species
MA_44394g0020 No alias NDR1/HIN1-like protein 6 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
MA_564044g0010 No alias NDR1/HIN1-like protein 10 OS=Arabidopsis thaliana... 0.04 OrthoFinder output from all 47 species
MA_606673g0010 No alias NDR1/HIN1-like protein 2 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
MA_63890g0010 No alias NDR1/HIN1-like protein 6 OS=Arabidopsis thaliana... 0.05 OrthoFinder output from all 47 species
MA_696598g0010 No alias NDR1/HIN1-like protein 26 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
MA_71979g0010 No alias NDR1/HIN1-like protein 2 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
MA_740280g0010 No alias NDR1/HIN1-like protein 6 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
Mp6g19740.1 NHL10, YLS9, ATNHL10 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Mp8g07630.1 No alias no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
Nbi_g12069 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g02242 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g21831 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g25977 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pnu_g06486 NHL25 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Solyc02g036480.1.1 NHL25, Solyc02g036480 NDR1/HIN1-like protein 6 OS=Arabidopsis thaliana... 0.05 OrthoFinder output from all 47 species
Solyc02g080100.1.1 Solyc02g080100 NDR1/HIN1-like protein 2 OS=Arabidopsis thaliana... 0.1 OrthoFinder output from all 47 species
Solyc02g081450.2.1 Solyc02g081450 NDR1/HIN1-like protein 6 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
Solyc03g019920.1.1 Solyc03g019920 NDR1/HIN1-like protein 6 OS=Arabidopsis thaliana... 0.04 OrthoFinder output from all 47 species
Solyc10g150145.1.1 NHL1, Solyc10g150145 NDR1/HIN1-like protein 1 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
Solyc11g066490.1.1 Solyc11g066490 Uncharacterized protein At1g08160 OS=Arabidopsis... 0.08 OrthoFinder output from all 47 species
Solyc11g069970.1.1 Solyc11g069970 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Solyc12g095980.2.1 Solyc12g095980 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Zm00001e002284_P001 Zm00001e002284 no hits & (original description: none) 0.09 OrthoFinder output from all 47 species
Zm00001e006462_P001 Zm00001e006462 no hits & (original description: none) 0.12 OrthoFinder output from all 47 species
Zm00001e008171_P001 Zm00001e008171 NDR1/HIN1-like protein 1 OS=Arabidopsis thaliana... 0.04 OrthoFinder output from all 47 species
Zm00001e010501_P001 Zm00001e010501 no hits & (original description: none) 0.14 OrthoFinder output from all 47 species
Zm00001e012610_P001 Zm00001e012610 NDR1/HIN1-like protein 6 OS=Arabidopsis thaliana... 0.04 OrthoFinder output from all 47 species
Zm00001e014749_P001 Zm00001e014749 NDR1/HIN1-like protein 1 OS=Arabidopsis thaliana... 0.04 OrthoFinder output from all 47 species
Zm00001e019498_P001 Zm00001e019498 NDR1/HIN1-like protein 13 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
Zm00001e020501_P001 Zm00001e020501 no hits & (original description: none) 0.06 OrthoFinder output from all 47 species
Zm00001e025983_P001 Zm00001e025983 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Zm00001e035148_P001 Zm00001e035148 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Zm00001e039408_P001 Zm00001e039408 NDR1/HIN1-like protein 1 OS=Arabidopsis thaliana... 0.04 OrthoFinder output from all 47 species
Zm00001e040847_P001 Zm00001e040847 NDR1/HIN1-like protein 1 OS=Arabidopsis thaliana... 0.04 OrthoFinder output from all 47 species
Zm00001e041977_P001 Zm00001e041977 NDR1/HIN1-like protein 1 OS=Arabidopsis thaliana... 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
MF GO:0030599 pectinesterase activity IEP HCCA
BP GO:0042545 cell wall modification IEP HCCA
BP GO:0045229 external encapsulating structure organization IEP HCCA
MF GO:0052689 carboxylic ester hydrolase activity IEP HCCA
BP GO:0071554 cell wall organization or biogenesis IEP HCCA
BP GO:0071555 cell wall organization IEP HCCA
InterPro domains Description Start Stop
IPR004864 LEA_2 108 217
No external refs found!